Variant report

Variant	rs587103
Chromosome Location	chr11:83386007-83386008
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 26 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:26)

rs_ID	r²[population]
rs11233708	0.96[CEU][hapmap];0.94[CHB][hapmap];0.94[JPT][hapmap];0.84[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11233709	0.83[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs11233714	0.96[CEU][hapmap];0.94[CHB][hapmap];1.00[JPT][hapmap];0.86[AMR][1000 genomes];0.98[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12098926	0.82[ASN][1000 genomes]
rs12223386	0.80[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12226177	0.96[CEU][hapmap];0.94[CHB][hapmap];0.82[JPT][hapmap];0.90[EUR][1000 genomes]
rs1868892	0.92[CEU][hapmap];0.94[CHB][hapmap];0.89[JPT][hapmap];0.92[ASN][1000 genomes]
rs2443455	0.92[CEU][hapmap];1.00[CHB][hapmap];0.89[JPT][hapmap];0.92[ASN][1000 genomes]
rs604276	0.96[ASN][1000 genomes]
rs604787	0.87[CEU][hapmap];0.94[CHB][hapmap];0.82[JPT][hapmap];0.83[ASN][1000 genomes]
rs617859	0.98[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs633338	0.83[ASN][1000 genomes]
rs641737	0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs645596	0.92[CEU][hapmap];0.94[CHB][hapmap];0.86[ASN][1000 genomes]
rs650206	0.92[CEU][hapmap];0.88[CHB][hapmap];0.82[JPT][hapmap];0.90[EUR][1000 genomes]
rs6592137	0.96[CEU][hapmap];0.94[CHB][hapmap];0.83[JPT][hapmap];0.95[EUR][1000 genomes]
rs6592138	0.96[CEU][hapmap];0.94[CHB][hapmap];0.83[JPT][hapmap];0.91[EUR][1000 genomes]
rs668025	0.88[CEU][hapmap];0.93[CHB][hapmap];0.83[JPT][hapmap];0.90[ASN][1000 genomes]
rs688414	0.94[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs7106608	0.94[ASN][1000 genomes]
rs7109939	0.96[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7125165	0.92[CEU][hapmap];0.94[CHB][hapmap];0.82[JPT][hapmap];0.95[EUR][1000 genomes]
rs7927393	0.85[ASN][1000 genomes]
rs7928379	0.83[CEU][hapmap];0.94[CHB][hapmap];0.82[JPT][hapmap];0.90[ASN][1000 genomes]
rs7946175	0.92[ASN][1000 genomes]
rs7952084	0.83[CEU][hapmap];0.94[CHB][hapmap];0.82[JPT][hapmap];0.83[ASN][1000 genomes]

No data

Chromatin state (count:16 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:83374000-83386600	Weak transcription	Brain Anterior Caudate	brain
2	chr11:83374000-83387000	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
3	chr11:83374600-83387200	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
4	chr11:83374800-83392000	Weak transcription	Breast Myoepithelial Primary Cells	Breast
5	chr11:83378000-83390800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
6	chr11:83379400-83386800	Weak transcription	Brain Substantia Nigra	brain
7	chr11:83379600-83387000	Weak transcription	Brain Angular Gyrus	brain
8	chr11:83379600-83387000	Weak transcription	Brain Cingulate Gyrus	brain
9	chr11:83379600-83387000	Weak transcription	Brain Inferior Temporal Lobe	brain
10	chr11:83384200-83390200	Enhancers	Fetal Brain Male	brain
11	chr11:83385400-83386200	Enhancers	Hela-S3	cervix
12	chr11:83385600-83388000	Enhancers	Brain Hippocampus Middle	brain
13	chr11:83385800-83386200	Enhancers	GM12878-XiMat	blood
14	chr11:83385800-83386800	Weak transcription	Right Ventricle	heart
15	chr11:83385800-83387200	Weak transcription	Fetal Heart	heart
16	chr11:83386000-83387200	Weak transcription	Fetal Brain Female	brain

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