The 2.0 version of rSNPBase

Variant report

Variant rs12123807
Chromosome Location chr1:95449923-95449924
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:58 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:95422000-95450800 Weak transcription Cortex derived primary cultured neurospheres brain
2 chr1:95429000-95467600 Weak transcription Stomach Smooth Muscle stomach
3 chr1:95436600-95451200 Weak transcription Small Intestine intestine
4 chr1:95437600-95455600 Weak transcription ES-I3 Cell Line embryonic stem cell
5 chr1:95437800-95455000 Weak transcription Sigmoid Colon Sigmoid Colon
6 chr1:95437800-95458400 Weak transcription Liver Liver
7 chr1:95440200-95450600 Weak transcription Colon Smooth Muscle Colon
8 chr1:95445200-95450000 Enhancers Fetal Adrenal Gland Adrenal Gland
9 chr1:95446800-95455000 Weak transcription Left Ventricle heart
10 chr1:95446800-95457800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
11 chr1:95447000-95452200 Weak transcription Fetal Intestine Small intestine
12 chr1:95447000-95490800 Weak transcription Fetal Intestine Large intestine
13 chr1:95447600-95450800 Weak transcription Fetal Stomach stomach
14 chr1:95447600-95460400 Weak transcription Rectal Mucosa Donor 31 rectum
15 chr1:95448000-95455000 Weak transcription Fetal Muscle Trunk muscle
16 chr1:95448200-95451200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
17 chr1:95448200-95491000 Weak transcription Primary B cells from cord blood blood
18 chr1:95448400-95452400 Enhancers HSMMtube muscle
19 chr1:95448600-95451200 Weak transcription Primary hematopoietic stem cells short term culture blood
20 chr1:95448800-95451200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
21 chr1:95448800-95452400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
22 chr1:95448800-95455000 Weak transcription Duodenum Mucosa Duodenum
23 chr1:95448800-95460000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
24 chr1:95449000-95450400 Enhancers Muscle Satellite Cultured Cells --
25 chr1:95449000-95451800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
26 chr1:95449000-95453600 Weak transcription Psoas Muscle Psoas
27 chr1:95449000-95455000 Weak transcription Breast Myoepithelial Primary Cells Breast
28 chr1:95449000-95455000 Weak transcription Brain Hippocampus Middle brain
29 chr1:95449000-95455000 Weak transcription Stomach Mucosa stomach
30 chr1:95449000-95455400 Weak transcription Brain Angular Gyrus brain
31 chr1:95449000-95458600 Weak transcription Right Ventricle heart
32 chr1:95449000-95460800 Weak transcription Fetal Kidney kidney
33 chr1:95449200-95451000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
34 chr1:95449200-95451200 Weak transcription HepG2 liver
35 chr1:95449200-95451400 Weak transcription Brain Cingulate Gyrus brain
36 chr1:95449200-95452400 Weak transcription Primary T cells from cord blood blood
37 chr1:95449200-95452400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
38 chr1:95449200-95452400 Weak transcription HMEC breast
39 chr1:95449200-95452400 Weak transcription HSMM muscle
40 chr1:95449200-95452400 Weak transcription NH-A brain
41 chr1:95449200-95452400 Weak transcription NHLF lung
42 chr1:95449200-95452600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
43 chr1:95449200-95452600 Weak transcription Placenta Amnion Placenta Amnion
44 chr1:95449200-95452800 Weak transcription Adipose Nuclei Adipose
45 chr1:95449200-95453800 Weak transcription Skeletal Muscle Male skeletal muscle
46 chr1:95449200-95455000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
47 chr1:95449200-95455000 Weak transcription Fetal Muscle Leg muscle
48 chr1:95449200-95455000 Weak transcription Rectal Smooth Muscle rectum
49 chr1:95449200-95455000 Weak transcription Right Atrium heart
50 chr1:95449200-95455400 Weak transcription Fetal Heart heart

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Last update: Aug 31, 2015