Variant report

Variant	rs7532763
Chromosome Location	chr1:95482151-95482152
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 32 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:32)

rs_ID	r²[population]
rs11165280	0.81[ASN][1000 genomes]
rs11165283	1.00[CEU][hapmap];0.85[CHB][hapmap];0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11165284	0.85[CHB][hapmap];1.00[JPT][hapmap];0.93[ASN][1000 genomes]
rs12092678	0.81[ASN][1000 genomes]
rs12119383	0.93[ASN][1000 genomes]
rs12119469	1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[ASN][1000 genomes]
rs12119701	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs12121738	0.88[ASN][1000 genomes]
rs12123807	0.85[CHB][hapmap];1.00[JPT][hapmap];0.98[ASN][1000 genomes]
rs12124097	1.00[ASN][1000 genomes]
rs12124647	0.83[ASN][1000 genomes]
rs12126245	0.82[CHB][hapmap];1.00[JPT][hapmap];0.98[ASN][1000 genomes]
rs12129274	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs12137333	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs12139069	0.86[ASN][1000 genomes]
rs12141083	0.83[ASN][1000 genomes]
rs12142619	0.86[ASN][1000 genomes]
rs17112852	1.00[CHB][hapmap];0.93[ASN][1000 genomes]
rs4630158	1.00[CEU][hapmap];0.88[EUR][1000 genomes]
rs4847374	0.85[CHB][hapmap];1.00[JPT][hapmap];0.98[ASN][1000 genomes]
rs4847375	1.00[ASN][1000 genomes]
rs4847376	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs58602136	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61772635	0.83[AMR][1000 genomes];0.88[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs61772636	0.83[AMR][1000 genomes];0.88[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs61772641	1.00[ASN][1000 genomes]
rs72964574	0.84[AFR][1000 genomes]
rs72964575	0.84[AFR][1000 genomes]
rs7527765	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.80[AFR][1000 genomes];0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7551281	0.81[AFR][1000 genomes]
rs9787257	1.00[ASN][1000 genomes]
rs9787343	1.00[ASN][1000 genomes]

No data

Chromatin state (count:52 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:95447000-95490800	Weak transcription	Fetal Intestine Large	intestine
2	chr1:95448200-95491000	Weak transcription	Primary B cells from cord blood	blood
3	chr1:95468600-95482400	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
4	chr1:95469200-95487200	Weak transcription	Small Intestine	intestine
5	chr1:95476000-95490800	Weak transcription	Primary T cells from cord blood	blood
6	chr1:95478600-95484000	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
7	chr1:95478800-95485600	Enhancers	HepG2	liver
8	chr1:95479400-95485000	Enhancers	Cortex derived primary cultured neurospheres	brain
9	chr1:95479800-95483600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
10	chr1:95479800-95484400	Weak transcription	Hela-S3	cervix
11	chr1:95480000-95482600	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
12	chr1:95480000-95483600	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
13	chr1:95480000-95484000	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
14	chr1:95480000-95484000	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
15	chr1:95480000-95484000	Weak transcription	Fetal Lung	lung
16	chr1:95480000-95484000	Weak transcription	HSMM	muscle
17	chr1:95480000-95484000	Weak transcription	Osteobl	bone
18	chr1:95480000-95484200	Weak transcription	Muscle Satellite Cultured Cells	--
19	chr1:95480000-95484200	Weak transcription	A549	lung
20	chr1:95480000-95487000	Weak transcription	Brain Angular Gyrus	brain
21	chr1:95480000-95508800	Weak transcription	Skeletal Muscle Female	skeletal muscle
22	chr1:95480200-95483000	Weak transcription	Fetal Muscle Leg	muscle
23	chr1:95480200-95483400	Weak transcription	NHLF	lung
24	chr1:95480200-95484000	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
25	chr1:95480200-95484000	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
26	chr1:95480200-95484000	Weak transcription	Gastric	stomach
27	chr1:95480200-95484400	Weak transcription	Fetal Kidney	kidney
28	chr1:95480200-95487000	Weak transcription	HUVEC	blood vessel
29	chr1:95480200-95487200	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
30	chr1:95480200-95487200	Weak transcription	Ovary	ovary
31	chr1:95480200-95490600	Weak transcription	Liver	Liver
32	chr1:95480600-95487200	Weak transcription	Pancreatic Islets	Pancreatic Islet
33	chr1:95480600-95487800	Weak transcription	Skeletal Muscle Male	skeletal muscle
34	chr1:95480600-95488000	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
35	chr1:95480600-95491400	Weak transcription	Fetal Intestine Small	intestine
36	chr1:95480800-95482200	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
37	chr1:95480800-95482400	Weak transcription	Pancreas	Pancrea
38	chr1:95480800-95482800	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
39	chr1:95480800-95483400	Weak transcription	Stomach Mucosa	stomach
40	chr1:95480800-95484000	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
41	chr1:95480800-95484200	Weak transcription	Fetal Stomach	stomach
42	chr1:95480800-95484400	Weak transcription	Adipose Nuclei	Adipose
43	chr1:95480800-95490800	Weak transcription	Left Ventricle	heart
44	chr1:95481000-95484400	Enhancers	Breast Myoepithelial Primary Cells	Breast
45	chr1:95481000-95487000	Weak transcription	Fetal Brain Male	brain
46	chr1:95481200-95484800	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
47	chr1:95481400-95482800	Weak transcription	HSMMtube	muscle
48	chr1:95481400-95484600	Weak transcription	Duodenum Smooth Muscle	Duodenum
49	chr1:95481400-95486600	Weak transcription	Brain Anterior Caudate	brain
50	chr1:95481400-95486800	Weak transcription	Brain Hippocampus Middle	brain

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