Variant report

Variant	rs12261100
Chromosome Location	chr10:25324336-25324337
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr10:25317292..25320600-chr10:25323318..25325641,3	K562	blood:
2	chr10:25323935..25325492-chr10:25329192..25331957,2	K562	blood:
3	chr10:25304107..25305905-chr10:25323528..25325426,2	K562	blood:
4	chr10:25316591..25319353-chr10:25320878..25324829,4	K562	blood:

Variant related genes	Relation type
ENSG00000185875	Chromatin interaction
ENSG00000151023	Chromatin interaction

rs_ID	r²[population]
rs10828742	0.86[AFR][1000 genomes]
rs11014355	0.86[AFR][1000 genomes]
rs1124490	0.93[EUR][1000 genomes]
rs12241288	0.93[EUR][1000 genomes]
rs12248877	0.80[EUR][1000 genomes]
rs1388926	0.85[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs1409305	0.93[EUR][1000 genomes]
rs1552772	0.93[EUR][1000 genomes]
rs16925193	0.93[EUR][1000 genomes]
rs16925198	0.93[EUR][1000 genomes]
rs3808907	0.94[EUR][1000 genomes]
rs41279882	0.93[EUR][1000 genomes]
rs41279886	0.93[EUR][1000 genomes]
rs41279890	0.93[EUR][1000 genomes]
rs41279894	0.93[EUR][1000 genomes]
rs41304607	0.86[EUR][1000 genomes]
rs41307498	0.86[EUR][1000 genomes]
rs55788231	0.86[EUR][1000 genomes]
rs57639701	0.93[EUR][1000 genomes]
rs57642444	0.93[EUR][1000 genomes]
rs57695610	0.93[EUR][1000 genomes]
rs58164169	0.81[EUR][1000 genomes]
rs58320082	0.93[EUR][1000 genomes]
rs59189661	0.93[EUR][1000 genomes]
rs59876862	0.87[EUR][1000 genomes]
rs60880723	0.93[EUR][1000 genomes]
rs61278248	0.93[EUR][1000 genomes]
rs61585865	0.93[EUR][1000 genomes]
rs6482464	0.93[EUR][1000 genomes]
rs7072278	0.87[EUR][1000 genomes]
rs7073171	0.87[EUR][1000 genomes]
rs7075327	0.93[EUR][1000 genomes]
rs7080371	0.87[EUR][1000 genomes]
rs7083691	0.87[EUR][1000 genomes]
rs7099168	0.93[EUR][1000 genomes]
rs73606594	0.86[EUR][1000 genomes]
rs73606599	0.93[EUR][1000 genomes]
rs73606600	0.93[EUR][1000 genomes]
rs73608203	0.93[EUR][1000 genomes]
rs73608204	0.93[EUR][1000 genomes]
rs73608206	0.93[EUR][1000 genomes]
rs73608208	0.93[EUR][1000 genomes]
rs73608210	0.87[EUR][1000 genomes]
rs73608211	0.93[EUR][1000 genomes]
rs73608212	0.93[EUR][1000 genomes]
rs73608213	0.93[EUR][1000 genomes]
rs73608214	0.87[EUR][1000 genomes]
rs73608216	0.87[EUR][1000 genomes]
rs73608217	0.87[EUR][1000 genomes]
rs73608218	0.87[EUR][1000 genomes]
rs73608219	0.87[EUR][1000 genomes]
rs73608223	0.93[EUR][1000 genomes]
rs73608224	0.93[EUR][1000 genomes]
rs73608225	0.93[EUR][1000 genomes]
rs73608226	0.81[EUR][1000 genomes]
rs73608229	0.93[EUR][1000 genomes]
rs73608233	0.93[EUR][1000 genomes]
rs73608234	0.93[EUR][1000 genomes]
rs73608235	0.93[EUR][1000 genomes]
rs73608236	0.93[EUR][1000 genomes]
rs73608237	0.93[EUR][1000 genomes]
rs73608238	0.93[EUR][1000 genomes]
rs73608239	0.93[EUR][1000 genomes]
rs73608240	0.93[EUR][1000 genomes]
rs73608241	0.93[EUR][1000 genomes]
rs7905478	0.93[EUR][1000 genomes]
rs7920527	0.87[EUR][1000 genomes]
rs9663998	0.93[EUR][1000 genomes]

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:25307000-25325400	Weak transcription	Primary hematopoietic stem cells	blood
2	chr10:25320400-25325400	Weak transcription	Liver	Liver

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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