Variant report

Variant	rs7073171
Chromosome Location	chr10:25281600-25281601
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:25277210..25278984-chr10:25279762..25281866,2	K562	blood:
2	chr10:25239754..25241501-chr10:25279969..25281607,2	K562	blood:

rs_ID	r²[population]
rs11014436	1.00[CEU][hapmap]
rs1124490	1.00[CEU][hapmap];0.93[EUR][1000 genomes]
rs12241288	0.93[EUR][1000 genomes]
rs12248877	0.93[EUR][1000 genomes]
rs12261100	0.87[EUR][1000 genomes]
rs12265296	1.00[CEU][hapmap]
rs1388926	0.87[EUR][1000 genomes]
rs1409305	0.93[EUR][1000 genomes]
rs1552772	1.00[CEU][hapmap];0.93[EUR][1000 genomes]
rs16925193	0.93[EUR][1000 genomes]
rs16925198	1.00[CEU][hapmap];0.93[EUR][1000 genomes]
rs3808907	1.00[CEU][hapmap];1.00[TSI][hapmap];0.94[EUR][1000 genomes]
rs41279882	0.93[EUR][1000 genomes]
rs41279886	0.93[EUR][1000 genomes]
rs41279890	0.93[EUR][1000 genomes]
rs41279894	0.93[EUR][1000 genomes]
rs41304607	0.86[EUR][1000 genomes]
rs41307498	0.86[EUR][1000 genomes]
rs55788231	0.86[EUR][1000 genomes]
rs57639701	0.93[EUR][1000 genomes]
rs57642444	0.93[EUR][1000 genomes]
rs57695610	0.93[EUR][1000 genomes]
rs58164169	0.83[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs58320082	0.93[EUR][1000 genomes]
rs59189661	0.93[EUR][1000 genomes]
rs59876862	1.00[EUR][1000 genomes]
rs60880723	0.93[EUR][1000 genomes]
rs61278248	0.93[EUR][1000 genomes]
rs61585865	0.93[EUR][1000 genomes]
rs6482464	1.00[CEU][hapmap];0.83[TSI][hapmap];0.93[EUR][1000 genomes]
rs7072278	0.87[EUR][1000 genomes]
rs7075327	0.93[EUR][1000 genomes]
rs7075587	1.00[CEU][hapmap]
rs7080371	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7083691	0.87[EUR][1000 genomes]
rs7090132	1.00[CEU][hapmap]
rs7099168	1.00[CEU][hapmap];0.83[TSI][hapmap];0.93[EUR][1000 genomes]
rs73606594	0.86[EUR][1000 genomes]
rs73606599	0.93[EUR][1000 genomes]
rs73606600	0.93[EUR][1000 genomes]
rs73608203	0.93[EUR][1000 genomes]
rs73608204	0.93[EUR][1000 genomes]
rs73608206	0.93[EUR][1000 genomes]
rs73608208	0.93[EUR][1000 genomes]
rs73608210	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73608211	0.93[EUR][1000 genomes]
rs73608212	0.93[EUR][1000 genomes]
rs73608213	0.93[EUR][1000 genomes]
rs73608214	1.00[EUR][1000 genomes]
rs73608216	0.89[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs73608217	1.00[EUR][1000 genomes]
rs73608218	1.00[EUR][1000 genomes]
rs73608219	1.00[EUR][1000 genomes]
rs73608223	0.93[EUR][1000 genomes]
rs73608224	0.93[EUR][1000 genomes]
rs73608225	0.93[EUR][1000 genomes]
rs73608226	0.81[EUR][1000 genomes]
rs73608229	0.93[EUR][1000 genomes]
rs73608233	0.93[EUR][1000 genomes]
rs73608234	0.93[EUR][1000 genomes]
rs73608235	0.93[EUR][1000 genomes]
rs73608236	0.93[EUR][1000 genomes]
rs73608237	0.93[EUR][1000 genomes]
rs73608238	0.93[EUR][1000 genomes]
rs73608239	0.93[EUR][1000 genomes]
rs73608240	0.93[EUR][1000 genomes]
rs73608241	0.93[EUR][1000 genomes]
rs7902783	1.00[CEU][hapmap]
rs7903171	1.00[CEU][hapmap]
rs7905478	0.93[EUR][1000 genomes]
rs7906676	1.00[CEU][hapmap]
rs7918295	1.00[CEU][hapmap]
rs7920527	0.87[EUR][1000 genomes]
rs9663998	0.93[EUR][1000 genomes]

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:25264400-25281800	Weak transcription	Fetal Intestine Small	intestine
2	chr10:25264600-25292200	Weak transcription	Ovary	ovary
3	chr10:25278400-25282000	Weak transcription	Brain Cingulate Gyrus	brain
4	chr10:25278600-25283200	Weak transcription	Fetal Brain Female	brain
5	chr10:25280400-25283000	Strong transcription	Cortex derived primary cultured neurospheres	brain
6	chr10:25281000-25282200	Strong transcription	Ganglion Eminence derived primary cultured neurospheres	brain
7	chr10:25281200-25282800	Enhancers	K562	blood

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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