The 2.0 version of rSNPBase

Variant report

Variant rs12286637
Chromosome Location chr11:58359803-58359804
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:116 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:58347600-58360200 Weak transcription Esophagus oesophagus
2 chr11:58347600-58361400 Weak transcription Gastric stomach
3 chr11:58347600-58379600 Weak transcription Pancreas Pancrea
4 chr11:58347600-58379800 Weak transcription Lung lung
5 chr11:58347600-58380200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
6 chr11:58347800-58377200 Weak transcription Fetal Muscle Trunk muscle
7 chr11:58347800-58380200 Weak transcription Aorta Aorta
8 chr11:58348200-58377400 Weak transcription Fetal Kidney kidney
9 chr11:58348600-58360200 Weak transcription Stomach Mucosa stomach
10 chr11:58349000-58360000 Weak transcription Stomach Smooth Muscle stomach
11 chr11:58349000-58360200 Weak transcription Brain Inferior Temporal Lobe brain
12 chr11:58349200-58360200 Weak transcription Left Ventricle heart
13 chr11:58349200-58363200 Weak transcription Brain Germinal Matrix brain
14 chr11:58349200-58377400 Weak transcription HSMMtube muscle
15 chr11:58349200-58379600 Weak transcription Spleen Spleen
16 chr11:58349200-58380600 Weak transcription Fetal Brain Male brain
17 chr11:58349200-58384200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
18 chr11:58349200-58384800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
19 chr11:58349400-58360000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
20 chr11:58349400-58367600 Weak transcription iPS-15b Cell Line embryonic stem cell
21 chr11:58349600-58360000 Weak transcription Fetal Intestine Small intestine
22 chr11:58349600-58360000 Weak transcription Thymus Thymus
23 chr11:58349600-58360200 Weak transcription Fetal Heart heart
24 chr11:58349600-58364200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
25 chr11:58349600-58368200 Weak transcription Brain Anterior Caudate brain
26 chr11:58351000-58360400 Weak transcription Muscle Satellite Cultured Cells --
27 chr11:58351000-58361400 Weak transcription Rectal Smooth Muscle rectum
28 chr11:58351000-58367800 Weak transcription Cortex derived primary cultured neurospheres brain
29 chr11:58351200-58378200 Weak transcription Duodenum Smooth Muscle Duodenum
30 chr11:58351800-58360000 Weak transcription Brain Cingulate Gyrus brain
31 chr11:58352000-58368400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
32 chr11:58352600-58360000 Weak transcription Primary T helper naive cells from peripheral blood blood
33 chr11:58352600-58360200 Weak transcription Pancreatic Islets Pancreatic Islet
34 chr11:58352600-58379600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
35 chr11:58352800-58361800 Strong transcription Dnd41 blood
36 chr11:58353400-58367600 Weak transcription Hela-S3 cervix
37 chr11:58353600-58364400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
38 chr11:58354000-58360000 Weak transcription NHEK skin
39 chr11:58354000-58360200 Weak transcription Skeletal Muscle Male skeletal muscle
40 chr11:58354200-58360200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
41 chr11:58354200-58360200 Weak transcription Skeletal Muscle Female skeletal muscle
42 chr11:58354200-58364400 Weak transcription Primary neutrophils fromperipheralblood blood
43 chr11:58354400-58360000 Weak transcription Osteobl bone
44 chr11:58354600-58377400 Weak transcription Fetal Brain Female brain
45 chr11:58354800-58360200 Weak transcription Breast Myoepithelial Primary Cells Breast
46 chr11:58354800-58376800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
47 chr11:58355000-58360000 Weak transcription A549 lung
48 chr11:58355000-58363200 Weak transcription Primary T cells fromperipheralblood blood
49 chr11:58355000-58366800 Strong transcription Monocytes-CD14+_RO01746 blood
50 chr11:58355000-58367000 Weak transcription Primary hematopoietic stem cells blood

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Last update: Aug 31, 2015