The 2.0 version of rSNPBase

Variant report

Variant rs12293102
Chromosome Location chr11:58367994-58367995
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:117 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:58347600-58379600 Weak transcription Pancreas Pancrea
2 chr11:58347600-58379800 Weak transcription Lung lung
3 chr11:58347600-58380200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
4 chr11:58347800-58377200 Weak transcription Fetal Muscle Trunk muscle
5 chr11:58347800-58380200 Weak transcription Aorta Aorta
6 chr11:58348200-58377400 Weak transcription Fetal Kidney kidney
7 chr11:58349200-58377400 Weak transcription HSMMtube muscle
8 chr11:58349200-58379600 Weak transcription Spleen Spleen
9 chr11:58349200-58380600 Weak transcription Fetal Brain Male brain
10 chr11:58349200-58384200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
11 chr11:58349200-58384800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
12 chr11:58349600-58368200 Weak transcription Brain Anterior Caudate brain
13 chr11:58351200-58378200 Weak transcription Duodenum Smooth Muscle Duodenum
14 chr11:58352000-58368400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
15 chr11:58352600-58379600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
16 chr11:58354600-58377400 Weak transcription Fetal Brain Female brain
17 chr11:58354800-58376800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
18 chr11:58355000-58377200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
19 chr11:58355000-58377200 Weak transcription NH-A brain
20 chr11:58355600-58368000 Weak transcription Brain Angular Gyrus brain
21 chr11:58357200-58377200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
22 chr11:58360400-58370200 Weak transcription NHEK skin
23 chr11:58360400-58377200 Weak transcription Osteobl bone
24 chr11:58360400-58379600 Weak transcription ES-I3 Cell Line embryonic stem cell
25 chr11:58360600-58370200 Weak transcription Right Ventricle heart
26 chr11:58360600-58370800 Weak transcription H1 Cell Line embryonic stem cell
27 chr11:58360600-58372600 Weak transcription HUVEC blood vessel
28 chr11:58360600-58377200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
29 chr11:58360600-58378200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
30 chr11:58360600-58379000 Weak transcription Fetal Muscle Leg muscle
31 chr11:58360600-58379600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
32 chr11:58360600-58379600 Weak transcription Fetal Stomach stomach
33 chr11:58360600-58380200 Weak transcription Esophagus oesophagus
34 chr11:58360800-58368200 Weak transcription HUES6 Cell Line embryonic stem cell
35 chr11:58360800-58377200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
36 chr11:58360800-58377200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
37 chr11:58360800-58377200 Weak transcription Placenta Placenta
38 chr11:58360800-58377400 Weak transcription Stomach Smooth Muscle stomach
39 chr11:58360800-58378400 Weak transcription Fetal Lung lung
40 chr11:58360800-58379200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
41 chr11:58361000-58377200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
42 chr11:58361200-58370000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
43 chr11:58361200-58377400 Weak transcription Breast Myoepithelial Primary Cells Breast
44 chr11:58361400-58377400 Weak transcription Adipose Nuclei Adipose
45 chr11:58361600-58371800 Weak transcription Gastric stomach
46 chr11:58361600-58377400 Weak transcription HMEC breast
47 chr11:58361600-58378600 Weak transcription Brain Inferior Temporal Lobe brain
48 chr11:58361800-58368200 Weak transcription Brain Hippocampus Middle brain
49 chr11:58361800-58369200 Enhancers Primary T helper cells PMA-I stimulated --
50 chr11:58361800-58378800 Weak transcription Brain Cingulate Gyrus brain

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Last update: Aug 31, 2015