The 2.0 version of rSNPBase

Variant report

Variant rs12294582
Chromosome Location chr11:58293756-58293757
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:96 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:58290400-58294400 Weak transcription Sigmoid Colon Sigmoid Colon
2 chr11:58290400-58295400 Weak transcription Right Ventricle heart
3 chr11:58291600-58293800 Enhancers Thymus Thymus
4 chr11:58291600-58293800 Flanking Active TSS Monocytes-CD14+_RO01746 blood
5 chr11:58291600-58294000 Enhancers Primary Natural Killer cells fromperipheralblood blood
6 chr11:58291800-58294400 Weak transcription Psoas Muscle Psoas
7 chr11:58291800-58297200 Weak transcription Pancreas Pancrea
8 chr11:58292000-58294800 Weak transcription Rectal Smooth Muscle rectum
9 chr11:58292000-58295000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
10 chr11:58292000-58295000 Weak transcription Lung lung
11 chr11:58292000-58295000 Weak transcription Spleen Spleen
12 chr11:58292000-58295200 Weak transcription Small Intestine intestine
13 chr11:58292000-58295400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
14 chr11:58292000-58297200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
15 chr11:58292000-58299200 Weak transcription Esophagus oesophagus
16 chr11:58292000-58299400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
17 chr11:58292000-58314000 Weak transcription Brain Cingulate Gyrus brain
18 chr11:58292000-58317200 Weak transcription Pancreatic Islets Pancreatic Islet
19 chr11:58292000-58317600 Weak transcription Placenta Amnion Placenta Amnion
20 chr11:58292200-58294200 Weak transcription Adipose Nuclei Adipose
21 chr11:58292200-58294400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
22 chr11:58292200-58294400 Weak transcription Breast Myoepithelial Primary Cells Breast
23 chr11:58292200-58294400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
24 chr11:58292200-58294400 Weak transcription Muscle Satellite Cultured Cells --
25 chr11:58292200-58294400 Weak transcription Brain Substantia Nigra brain
26 chr11:58292200-58294400 Weak transcription Duodenum Smooth Muscle Duodenum
27 chr11:58292200-58294400 Weak transcription Fetal Muscle Leg muscle
28 chr11:58292200-58294400 Weak transcription Stomach Smooth Muscle stomach
29 chr11:58292200-58294400 Weak transcription HMEC breast
30 chr11:58292200-58294400 Weak transcription HSMM muscle
31 chr11:58292200-58294600 Weak transcription Skeletal Muscle Male skeletal muscle
32 chr11:58292200-58294800 Weak transcription Brain Anterior Caudate brain
33 chr11:58292200-58294800 Weak transcription Fetal Adrenal Gland Adrenal Gland
34 chr11:58292200-58294800 Weak transcription Skeletal Muscle Female skeletal muscle
35 chr11:58292200-58295000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
36 chr11:58292200-58295000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
37 chr11:58292200-58295000 Weak transcription Aorta Aorta
38 chr11:58292200-58295000 Weak transcription Brain Inferior Temporal Lobe brain
39 chr11:58292200-58295000 Weak transcription Fetal Intestine Large intestine
40 chr11:58292200-58295000 Weak transcription Ovary ovary
41 chr11:58292200-58295000 Weak transcription HSMMtube muscle
42 chr11:58292200-58297200 Weak transcription Brain Hippocampus Middle brain
43 chr11:58292200-58297400 Weak transcription Fetal Intestine Small intestine
44 chr11:58292200-58297800 Weak transcription Colonic Mucosa Colon
45 chr11:58292200-58299200 Weak transcription NHLF lung
46 chr11:58292200-58299800 Weak transcription NH-A brain
47 chr11:58292200-58307200 Weak transcription NHDF-Ad bronchial
48 chr11:58292200-58311400 Weak transcription Colon Smooth Muscle Colon
49 chr11:58292200-58312200 Weak transcription Placenta Placenta
50 chr11:58292200-58312400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived

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Last update: Aug 31, 2015