Variant report

Variant rs10160409
Chromosome Location chr11:58335548-58335549
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:95 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:58300000-58340600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
2 chr11:58300600-58338600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
3 chr11:58309000-58336200 Weak transcription NHEK skin
4 chr11:58309600-58338800 Strong transcription Primary monocytes fromperipheralblood blood
5 chr11:58315600-58340400 Weak transcription Stomach Mucosa stomach
6 chr11:58318200-58336400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
7 chr11:58318400-58341000 Weak transcription Right Ventricle heart
8 chr11:58318400-58344800 Weak transcription Fetal Brain Male brain
9 chr11:58318600-58344400 Weak transcription Placenta Amnion Placenta Amnion
10 chr11:58318800-58336800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
11 chr11:58318800-58340600 Weak transcription NHLF lung
12 chr11:58318800-58341400 Weak transcription Psoas Muscle Psoas
13 chr11:58319200-58343000 Weak transcription Fetal Brain Female brain
14 chr11:58320000-58341000 Weak transcription HSMMtube muscle
15 chr11:58320200-58340800 Weak transcription Colon Smooth Muscle Colon
16 chr11:58320600-58338200 Weak transcription HMEC breast
17 chr11:58321600-58336400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
18 chr11:58321600-58337200 Weak transcription Rectal Smooth Muscle rectum
19 chr11:58321600-58340400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
20 chr11:58321800-58340400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
21 chr11:58321800-58341200 Weak transcription Colonic Mucosa Colon
22 chr11:58321800-58345000 Weak transcription Ovary ovary
23 chr11:58322000-58336400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
24 chr11:58322200-58336400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
25 chr11:58322200-58337000 Weak transcription Primary neutrophils fromperipheralblood blood
26 chr11:58322400-58336200 Weak transcription Placenta Placenta
27 chr11:58322400-58336400 Weak transcription Fetal Muscle Leg muscle
28 chr11:58322400-58336800 Weak transcription Spleen Spleen
29 chr11:58322400-58344200 Weak transcription Fetal Lung lung
30 chr11:58324400-58336000 Strong transcription Monocytes-CD14+_RO01746 blood
31 chr11:58327200-58336400 Genic enhancers Primary T regulatory cells fromperipheralblood blood
32 chr11:58329400-58341000 Weak transcription Brain Angular Gyrus brain
33 chr11:58329400-58342600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
34 chr11:58329400-58344400 Weak transcription Cortex derived primary cultured neurospheres brain
35 chr11:58329800-58336200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
36 chr11:58330200-58336400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
37 chr11:58330200-58343000 Weak transcription Fetal Kidney kidney
38 chr11:58330400-58336000 Weak transcription Brain Cingulate Gyrus brain
39 chr11:58330400-58336800 Weak transcription Pancreas Pancrea
40 chr11:58330400-58338800 Genic enhancers Primary T helper cells PMA-I stimulated --
41 chr11:58330600-58336400 Weak transcription Skeletal Muscle Male skeletal muscle
42 chr11:58330600-58345000 Weak transcription Gastric stomach
43 chr11:58330800-58335600 Weak transcription Brain Inferior Temporal Lobe brain
44 chr11:58330800-58336200 Weak transcription Liver Liver
45 chr11:58330800-58336200 Weak transcription Fetal Muscle Trunk muscle
46 chr11:58331000-58336200 Weak transcription Duodenum Mucosa Duodenum
47 chr11:58331000-58338000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
48 chr11:58331400-58336000 Weak transcription Adipose Nuclei Adipose
49 chr11:58331400-58336000 Weak transcription Fetal Adrenal Gland Adrenal Gland
50 chr11:58331400-58336200 Weak transcription Rectal Mucosa Donor 29 rectum

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