The 2.0 version of rSNPBase

Variant report

Variant rs10160825
Chromosome Location chr11:58354132-58354133
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:114 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:58347600-58360200 Weak transcription Esophagus oesophagus
2 chr11:58347600-58361400 Weak transcription Gastric stomach
3 chr11:58347600-58379600 Weak transcription Pancreas Pancrea
4 chr11:58347600-58379800 Weak transcription Lung lung
5 chr11:58347600-58380200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
6 chr11:58347800-58377200 Weak transcription Fetal Muscle Trunk muscle
7 chr11:58347800-58380200 Weak transcription Aorta Aorta
8 chr11:58348200-58377400 Weak transcription Fetal Kidney kidney
9 chr11:58348600-58360200 Weak transcription Stomach Mucosa stomach
10 chr11:58348800-58354600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
11 chr11:58349000-58358200 Weak transcription Ovary ovary
12 chr11:58349000-58359200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
13 chr11:58349000-58359800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
14 chr11:58349000-58360000 Weak transcription Stomach Smooth Muscle stomach
15 chr11:58349000-58360200 Weak transcription Brain Inferior Temporal Lobe brain
16 chr11:58349200-58359200 Weak transcription Fetal Muscle Leg muscle
17 chr11:58349200-58359200 Weak transcription Fetal Stomach stomach
18 chr11:58349200-58360200 Weak transcription Left Ventricle heart
19 chr11:58349200-58363200 Weak transcription Brain Germinal Matrix brain
20 chr11:58349200-58377400 Weak transcription HSMMtube muscle
21 chr11:58349200-58379600 Weak transcription Spleen Spleen
22 chr11:58349200-58380600 Weak transcription Fetal Brain Male brain
23 chr11:58349200-58384200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
24 chr11:58349200-58384800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
25 chr11:58349400-58359200 Weak transcription Sigmoid Colon Sigmoid Colon
26 chr11:58349400-58360000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
27 chr11:58349400-58367600 Weak transcription iPS-15b Cell Line embryonic stem cell
28 chr11:58349600-58354800 Weak transcription Brain Substantia Nigra brain
29 chr11:58349600-58360000 Weak transcription Fetal Intestine Small intestine
30 chr11:58349600-58360000 Weak transcription Thymus Thymus
31 chr11:58349600-58360200 Weak transcription Fetal Heart heart
32 chr11:58349600-58364200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
33 chr11:58349600-58368200 Weak transcription Brain Anterior Caudate brain
34 chr11:58349800-58354200 Weak transcription Fetal Lung lung
35 chr11:58349800-58354600 Weak transcription Primary hematopoietic stem cells blood
36 chr11:58349800-58354600 Weak transcription Brain Hippocampus Middle brain
37 chr11:58349800-58359000 Weak transcription NHLF lung
38 chr11:58350200-58359200 Weak transcription Small Intestine intestine
39 chr11:58350800-58354600 Weak transcription Breast Myoepithelial Primary Cells Breast
40 chr11:58350800-58354600 Weak transcription NH-A brain
41 chr11:58350800-58354800 Weak transcription Brain Angular Gyrus brain
42 chr11:58350800-58359000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
43 chr11:58351000-58354400 Weak transcription Adipose Nuclei Adipose
44 chr11:58351000-58354800 Weak transcription Duodenum Mucosa Duodenum
45 chr11:58351000-58360400 Weak transcription Muscle Satellite Cultured Cells --
46 chr11:58351000-58361400 Weak transcription Rectal Smooth Muscle rectum
47 chr11:58351000-58367800 Weak transcription Cortex derived primary cultured neurospheres brain
48 chr11:58351200-58378200 Weak transcription Duodenum Smooth Muscle Duodenum
49 chr11:58351400-58357600 Weak transcription Rectal Mucosa Donor 31 rectum
50 chr11:58351800-58354400 Strong transcription HSMM muscle

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Last update: Aug 31, 2015