The 2.0 version of rSNPBase

Variant report

Variant rs12518711
Chromosome Location chr5:80148179-80148180
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:93 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:80042800-80173400 Weak transcription Right Ventricle heart
2 chr5:80087800-80167400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
3 chr5:80091400-80181000 Weak transcription Small Intestine intestine
4 chr5:80125200-80151400 Weak transcription Rectal Mucosa Donor 31 rectum
5 chr5:80125200-80161600 Weak transcription Skeletal Muscle Female skeletal muscle
6 chr5:80137600-80152600 Weak transcription Rectal Smooth Muscle rectum
7 chr5:80141200-80161000 Weak transcription Brain Cingulate Gyrus brain
8 chr5:80141200-80178800 Weak transcription Placenta Amnion Placenta Amnion
9 chr5:80142000-80152600 Weak transcription Brain Angular Gyrus brain
10 chr5:80142400-80151200 Weak transcription Ovary ovary
11 chr5:80143000-80175400 Weak transcription HMEC breast
12 chr5:80143600-80151400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
13 chr5:80143800-80156600 Weak transcription Osteobl bone
14 chr5:80145400-80152600 Weak transcription Fetal Kidney kidney
15 chr5:80145600-80150600 Weak transcription Primary T helper naive cells fromperipheralblood blood
16 chr5:80145600-80150600 Weak transcription Rectal Mucosa Donor 29 rectum
17 chr5:80145600-80151000 Weak transcription Fetal Intestine Large intestine
18 chr5:80145600-80151200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
19 chr5:80145600-80151200 Weak transcription Fetal Adrenal Gland Adrenal Gland
20 chr5:80145600-80151400 Weak transcription Lung lung
21 chr5:80145600-80152600 Weak transcription Fetal Lung lung
22 chr5:80145600-80153800 Weak transcription Brain Inferior Temporal Lobe brain
23 chr5:80145600-80157000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
24 chr5:80145600-80172800 Weak transcription Skeletal Muscle Male skeletal muscle
25 chr5:80145600-80175600 Weak transcription Primary T killer memory cells from peripheral blood blood
26 chr5:80145600-80181000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
27 chr5:80145800-80150400 Weak transcription Primary T cells fromperipheralblood blood
28 chr5:80145800-80167400 Weak transcription Placenta Placenta
29 chr5:80145800-80173400 Weak transcription Colonic Mucosa Colon
30 chr5:80146000-80150200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
31 chr5:80146000-80173400 Weak transcription Esophagus oesophagus
32 chr5:80146200-80150000 Weak transcription Liver Liver
33 chr5:80146200-80151200 Weak transcription Sigmoid Colon Sigmoid Colon
34 chr5:80146400-80150400 Weak transcription Primary B cells from peripheral blood blood
35 chr5:80146400-80150400 Weak transcription Primary T regulatory cells fromperipheralblood blood
36 chr5:80146400-80150400 Weak transcription Duodenum Smooth Muscle Duodenum
37 chr5:80146400-80151200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
38 chr5:80146400-80151200 Weak transcription Fetal Muscle Trunk muscle
39 chr5:80146400-80151400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
40 chr5:80146400-80151400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
41 chr5:80146400-80151400 Weak transcription Pancreas Pancrea
42 chr5:80146400-80152400 Weak transcription Pancreatic Islets Pancreatic Islet
43 chr5:80146400-80162600 Weak transcription Fetal Stomach stomach
44 chr5:80146400-80162800 Weak transcription Gastric stomach
45 chr5:80146400-80167200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
46 chr5:80146400-80167200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
47 chr5:80146400-80170600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
48 chr5:80146400-80173400 Weak transcription Brain Substantia Nigra brain
49 chr5:80146600-80148200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
50 chr5:80146600-80149600 Weak transcription Primary B cells from cord blood blood

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Last update: Aug 31, 2015