The 2.0 version of rSNPBase

Variant report

Variant rs32963
Chromosome Location chr5:80174728-80174729
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:111 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:80091400-80181000 Weak transcription Small Intestine intestine
2 chr5:80141200-80178800 Weak transcription Placenta Amnion Placenta Amnion
3 chr5:80143000-80175400 Weak transcription HMEC breast
4 chr5:80145600-80175600 Weak transcription Primary T killer memory cells from peripheral blood blood
5 chr5:80145600-80181000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
6 chr5:80148600-80175600 Weak transcription Primary T helper naive cells from peripheral blood blood
7 chr5:80149200-80176200 Weak transcription Colon Smooth Muscle Colon
8 chr5:80149800-80180000 Weak transcription Psoas Muscle Psoas
9 chr5:80151600-80175600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
10 chr5:80152800-80179000 Weak transcription Rectal Smooth Muscle rectum
11 chr5:80157600-80180000 Weak transcription iPS-18 Cell Line embryonic stem cell
12 chr5:80163000-80175400 Weak transcription Skeletal Muscle Female skeletal muscle
13 chr5:80163000-80181400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
14 chr5:80163200-80175600 Weak transcription Fetal Muscle Leg muscle
15 chr5:80163200-80180000 Weak transcription Fetal Kidney kidney
16 chr5:80163200-80186600 Weak transcription HSMMtube muscle
17 chr5:80163200-80188400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
18 chr5:80167800-80177200 Weak transcription NHLF lung
19 chr5:80167800-80178200 Weak transcription Placenta Placenta
20 chr5:80167800-80180800 Weak transcription K562 blood
21 chr5:80167800-80187200 Weak transcription H1 Cell Line embryonic stem cell
22 chr5:80168200-80175400 Strong transcription Primary Natural Killer cells fromperipheralblood blood
23 chr5:80169600-80190600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
24 chr5:80170000-80175200 Strong transcription Breast Myoepithelial Primary Cells Breast
25 chr5:80171200-80183600 Weak transcription Primary hematopoietic stem cells blood
26 chr5:80171200-80186400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
27 chr5:80171400-80196400 Weak transcription Hela-S3 cervix
28 chr5:80171600-80177000 Weak transcription Fetal Thymus thymus
29 chr5:80171800-80186800 Weak transcription Cortex derived primary cultured neurospheres brain
30 chr5:80172000-80180000 Weak transcription iPS-20b Cell Line embryonic stem cell
31 chr5:80172200-80186400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
32 chr5:80173200-80181000 Weak transcription Primary T helper naive cells fromperipheralblood blood
33 chr5:80173600-80175400 Strong transcription HSMM muscle
34 chr5:80173600-80181400 Weak transcription Ovary ovary
35 chr5:80173600-80208000 Weak transcription Brain Inferior Temporal Lobe brain
36 chr5:80173800-80175400 Weak transcription Colonic Mucosa Colon
37 chr5:80173800-80177600 Weak transcription HUES6 Cell Line embryonic stem cell
38 chr5:80173800-80179000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
39 chr5:80173800-80181200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
40 chr5:80173800-80186200 Weak transcription Fetal Brain Female brain
41 chr5:80173800-80188600 Weak transcription Primary T helper cells PMA-I stimulated --
42 chr5:80174000-80174800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
43 chr5:80174000-80174800 Weak transcription Liver Liver
44 chr5:80174000-80175000 Weak transcription Pancreatic Islets Pancreatic Islet
45 chr5:80174000-80175600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
46 chr5:80174000-80175600 Weak transcription GM12878-XiMat blood
47 chr5:80174000-80176200 Weak transcription Primary T cells from cord blood blood
48 chr5:80174000-80176200 Weak transcription Aorta Aorta
49 chr5:80174000-80176400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
50 chr5:80174000-80176600 Weak transcription Skeletal Muscle Male skeletal muscle

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015