The 2.0 version of rSNPBase

Variant report

Variant rs32964
Chromosome Location chr5:80175797-80175798
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:100 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:80091400-80181000 Weak transcription Small Intestine intestine
2 chr5:80141200-80178800 Weak transcription Placenta Amnion Placenta Amnion
3 chr5:80145600-80181000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
4 chr5:80149200-80176200 Weak transcription Colon Smooth Muscle Colon
5 chr5:80149800-80180000 Weak transcription Psoas Muscle Psoas
6 chr5:80152800-80179000 Weak transcription Rectal Smooth Muscle rectum
7 chr5:80157600-80180000 Weak transcription iPS-18 Cell Line embryonic stem cell
8 chr5:80163000-80181400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
9 chr5:80163200-80180000 Weak transcription Fetal Kidney kidney
10 chr5:80163200-80186600 Weak transcription HSMMtube muscle
11 chr5:80163200-80188400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
12 chr5:80167800-80177200 Weak transcription NHLF lung
13 chr5:80167800-80178200 Weak transcription Placenta Placenta
14 chr5:80167800-80180800 Weak transcription K562 blood
15 chr5:80167800-80187200 Weak transcription H1 Cell Line embryonic stem cell
16 chr5:80169600-80190600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
17 chr5:80171200-80183600 Weak transcription Primary hematopoietic stem cells blood
18 chr5:80171200-80186400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
19 chr5:80171400-80196400 Weak transcription Hela-S3 cervix
20 chr5:80171600-80177000 Weak transcription Fetal Thymus thymus
21 chr5:80171800-80186800 Weak transcription Cortex derived primary cultured neurospheres brain
22 chr5:80172000-80180000 Weak transcription iPS-20b Cell Line embryonic stem cell
23 chr5:80172200-80186400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
24 chr5:80173200-80181000 Weak transcription Primary T helper naive cells fromperipheralblood blood
25 chr5:80173600-80181400 Weak transcription Ovary ovary
26 chr5:80173600-80208000 Weak transcription Brain Inferior Temporal Lobe brain
27 chr5:80173800-80177600 Weak transcription HUES6 Cell Line embryonic stem cell
28 chr5:80173800-80179000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
29 chr5:80173800-80181200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
30 chr5:80173800-80186200 Weak transcription Fetal Brain Female brain
31 chr5:80173800-80188600 Weak transcription Primary T helper cells PMA-I stimulated --
32 chr5:80174000-80176200 Weak transcription Primary T cells from cord blood blood
33 chr5:80174000-80176200 Weak transcription Aorta Aorta
34 chr5:80174000-80176400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
35 chr5:80174000-80176600 Weak transcription Skeletal Muscle Male skeletal muscle
36 chr5:80174000-80177000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
37 chr5:80174000-80177000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
38 chr5:80174000-80177600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
39 chr5:80174000-80177600 Weak transcription HUES64 Cell Line embryonic stem cell
40 chr5:80174000-80178400 Weak transcription Esophagus oesophagus
41 chr5:80174000-80178600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
42 chr5:80174000-80178800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
43 chr5:80174000-80178800 Weak transcription Pancreas Pancrea
44 chr5:80174000-80180000 Weak transcription Brain Substantia Nigra brain
45 chr5:80174000-80180000 Weak transcription Fetal Adrenal Gland Adrenal Gland
46 chr5:80174000-80180200 Weak transcription Fetal Intestine Large intestine
47 chr5:80174000-80180400 Weak transcription Sigmoid Colon Sigmoid Colon
48 chr5:80174000-80180600 Weak transcription Fetal Intestine Small intestine
49 chr5:80174000-80181000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
50 chr5:80174000-80181000 Weak transcription NHEK skin

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Last update: Aug 31, 2015