The 2.0 version of rSNPBase

Variant report

Variant rs40591
Chromosome Location chr5:80113846-80113847
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:99 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:80042800-80118200 Weak transcription Spleen Spleen
2 chr5:80042800-80173400 Weak transcription Right Ventricle heart
3 chr5:80075200-80114000 Weak transcription Stomach Mucosa stomach
4 chr5:80077600-80118800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
5 chr5:80085200-80127600 Weak transcription Primary T helper naive cells from peripheral blood blood
6 chr5:80087400-80132800 Weak transcription Primary T killer memory cells from peripheral blood blood
7 chr5:80087800-80167400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
8 chr5:80089400-80118400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
9 chr5:80089400-80120200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
10 chr5:80089600-80118400 Weak transcription NHEK skin
11 chr5:80089800-80118400 Weak transcription HUES6 Cell Line embryonic stem cell
12 chr5:80090000-80118600 Weak transcription iPS-20b Cell Line embryonic stem cell
13 chr5:80090200-80118400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
14 chr5:80090400-80124600 Weak transcription Colon Smooth Muscle Colon
15 chr5:80090600-80124000 Weak transcription Primary T helper cells PMA-I stimulated --
16 chr5:80091000-80116600 Weak transcription A549 lung
17 chr5:80091200-80116000 Weak transcription Brain Substantia Nigra brain
18 chr5:80091200-80144400 Weak transcription Stomach Smooth Muscle stomach
19 chr5:80091400-80114200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
20 chr5:80091400-80114800 Weak transcription Thymus Thymus
21 chr5:80091400-80117600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
22 chr5:80091400-80118600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
23 chr5:80091400-80124600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
24 chr5:80091400-80124600 Weak transcription Rectal Mucosa Donor 31 rectum
25 chr5:80091400-80124600 Weak transcription Rectal Smooth Muscle rectum
26 chr5:80091400-80181000 Weak transcription Small Intestine intestine
27 chr5:80091800-80125200 Weak transcription Osteobl bone
28 chr5:80093000-80124200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
29 chr5:80093800-80123800 Weak transcription Pancreas Pancrea
30 chr5:80094800-80124000 Weak transcription GM12878-XiMat blood
31 chr5:80095200-80115400 Weak transcription Psoas Muscle Psoas
32 chr5:80095200-80116600 Weak transcription HUES48 Cell Line embryonic stem cell
33 chr5:80096600-80118400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
34 chr5:80097000-80124400 Weak transcription Brain Cingulate Gyrus brain
35 chr5:80097600-80121400 Weak transcription Cortex derived primary cultured neurospheres brain
36 chr5:80097600-80121600 Weak transcription Brain Hippocampus Middle brain
37 chr5:80097800-80121600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
38 chr5:80098400-80121600 Weak transcription Brain Anterior Caudate brain
39 chr5:80099200-80117200 Weak transcription Fetal Brain Male brain
40 chr5:80099200-80121400 Weak transcription Fetal Lung lung
41 chr5:80100400-80118400 Weak transcription HMEC breast
42 chr5:80103000-80118400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
43 chr5:80103800-80118400 Weak transcription Ovary ovary
44 chr5:80103800-80144600 Weak transcription Gastric stomach
45 chr5:80106400-80119400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
46 chr5:80107200-80123800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
47 chr5:80108800-80118000 Weak transcription Fetal Heart heart
48 chr5:80109800-80114000 Weak transcription Fetal Adrenal Gland Adrenal Gland
49 chr5:80109800-80119800 Weak transcription Sigmoid Colon Sigmoid Colon
50 chr5:80109800-80121600 Weak transcription Fetal Muscle Leg muscle

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Last update: Aug 31, 2015