Variant report

Variant rs12523615
Chromosome Location chr5:60971051-60971052
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:42 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:60955200-60974400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr5:60968000-60972000 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr5:60968200-60971200 Enhancers Brain Anterior Caudate brain
4 chr5:60968200-60971200 Enhancers Brain Hippocampus Middle brain
5 chr5:60968200-60971400 Enhancers Colonic Mucosa Colon
6 chr5:60968200-60971400 Enhancers Fetal Intestine Large intestine
7 chr5:60968200-60971400 Enhancers Fetal Intestine Small intestine
8 chr5:60968400-60971800 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
9 chr5:60968400-60971800 Enhancers Cortex derived primary cultured neurospheres brain
10 chr5:60968400-60972400 Enhancers Brain Cingulate Gyrus brain
11 chr5:60968600-60971200 Enhancers Brain Substantia Nigra brain
12 chr5:60968800-60971400 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
13 chr5:60968800-60971600 Enhancers Duodenum Mucosa Duodenum
14 chr5:60968800-60972000 Enhancers Brain Angular Gyrus brain
15 chr5:60968800-60972400 Enhancers Brain Inferior Temporal Lobe brain
16 chr5:60969200-60971200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
17 chr5:60969400-60971800 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
18 chr5:60969400-60972200 Enhancers Rectal Mucosa Donor 31 rectum
19 chr5:60969600-60972000 Enhancers Rectal Mucosa Donor 29 rectum
20 chr5:60970000-60971600 Enhancers Fetal Muscle Trunk muscle
21 chr5:60970200-60971400 Enhancers Gastric stomach
22 chr5:60970200-60971400 Enhancers Stomach Mucosa stomach
23 chr5:60970400-60971200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
24 chr5:60970400-60971400 Enhancers Lung lung
25 chr5:60970400-60971600 Enhancers Small Intestine intestine
26 chr5:60970400-60972000 Enhancers Sigmoid Colon Sigmoid Colon
27 chr5:60970400-60972200 Enhancers Brain Germinal Matrix brain
28 chr5:60970400-60972400 Enhancers Pancreas Pancrea
29 chr5:60970600-60971200 Enhancers HMEC breast
30 chr5:60970600-60971400 Enhancers H9 Cell Line embryonic stem cell
31 chr5:60970800-60971200 Enhancers HUES48 Cell Line embryonic stem cell
32 chr5:60970800-60971200 Weak transcription Spleen Spleen
33 chr5:60970800-60971400 Enhancers H1 Cell Line embryonic stem cell
34 chr5:60970800-60971400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
35 chr5:60970800-60971600 Enhancers Breast Myoepithelial Primary Cells Breast
36 chr5:60970800-60972000 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
37 chr5:60971000-60971400 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
38 chr5:60971000-60971400 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
39 chr5:60971000-60971400 Enhancers ES-UCSF4 Cell Line embryonic stem cell
40 chr5:60971000-60971600 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
41 chr5:60971000-60971600 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
42 chr5:60971000-60971600 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin

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