Variant report

Variant	rs9291733
Chromosome Location	chr5:61014425-61014426
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 39 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:39)

rs_ID	r²[population]
rs1032750	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.94[GIH][hapmap];0.95[JPT][hapmap];1.00[TSI][hapmap];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10514916	1.00[ASW][hapmap];0.95[CEU][hapmap];0.94[GIH][hapmap];0.91[MEX][hapmap];0.85[TSI][hapmap];0.93[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs12522477	0.95[CEU][hapmap]
rs12523615	0.81[EUR][1000 genomes]
rs1501842	0.95[CEU][hapmap];0.91[CHB][hapmap];1.00[CHD][hapmap];0.89[GIH][hapmap];1.00[JPT][hapmap];0.96[MEX][hapmap];1.00[TSI][hapmap];0.97[AMR][1000 genomes];0.94[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs1501843	0.86[AFR][1000 genomes];0.93[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs1501844	0.86[AFR][1000 genomes];0.93[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs1604440	0.95[CEU][hapmap];0.84[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs1604441	0.95[CEU][hapmap];0.86[AFR][1000 genomes];0.93[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs16875007	0.95[CEU][hapmap];0.82[MEX][hapmap]
rs16893327	0.95[CEU][hapmap]
rs16893398	0.95[CEU][hapmap];0.83[MEX][hapmap]
rs16893470	0.95[CEU][hapmap];0.81[EUR][1000 genomes]
rs16893616	0.95[CEU][hapmap];0.93[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs16893642	0.95[CEU][hapmap];0.93[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs16893680	0.95[CEU][hapmap];0.94[GIH][hapmap];0.91[MEX][hapmap];0.81[TSI][hapmap];0.91[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs16893684	0.95[CEU][hapmap];0.94[GIH][hapmap];0.91[MEX][hapmap];0.85[TSI][hapmap];0.91[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs16893698	0.90[CEU][hapmap];0.81[CHB][hapmap];0.86[AFR][1000 genomes];0.93[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs16893701	0.86[AFR][1000 genomes];0.93[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs1979016	0.91[CEU][hapmap]
rs2030888	1.00[ASW][hapmap];0.91[CEU][hapmap];0.82[CHB][hapmap];0.95[CHD][hapmap];0.91[GIH][hapmap];0.90[JPT][hapmap];0.83[MEX][hapmap];0.81[TSI][hapmap];0.86[AFR][1000 genomes];0.88[AMR][1000 genomes];0.86[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs2280686	0.95[CEU][hapmap];0.83[MEX][hapmap]
rs2280687	0.95[CEU][hapmap];0.82[EUR][1000 genomes]
rs2937626	1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2937831	0.95[CEU][hapmap];0.86[AFR][1000 genomes];0.96[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs2950219	0.93[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs2950220	0.95[CEU][hapmap];0.91[JPT][hapmap];0.89[AMR][1000 genomes];0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs2974452	0.95[CEU][hapmap];0.82[CHB][hapmap];0.90[CHD][hapmap];0.94[GIH][hapmap];0.91[JPT][hapmap];0.88[MEX][hapmap];0.92[TSI][hapmap];0.90[AMR][1000 genomes];0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs4145723	0.95[CEU][hapmap];0.86[AFR][1000 genomes];0.93[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs4700422	0.95[CEU][hapmap]
rs4700423	0.95[CEU][hapmap];0.87[MEX][hapmap]
rs4700425	1.00[ASW][hapmap];0.95[CEU][hapmap];0.94[GIH][hapmap];0.91[MEX][hapmap];0.85[TSI][hapmap];0.93[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs4700427	0.93[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs55680328	0.86[AFR][1000 genomes];0.93[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs58983571	0.86[AFR][1000 genomes];0.93[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs6449548	0.81[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs7381041	0.97[AMR][1000 genomes];0.94[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7446832	0.81[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs7447792	0.86[ASN][1000 genomes]

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:60997800-61015200	Weak transcription	Brain Inferior Temporal Lobe	brain
2	chr5:61014400-61015400	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin

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