The 2.0 version of rSNPBase

Variant report

Variant rs12566162
Chromosome Location chr1:57771899-57771900
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:17 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:57770000-57775400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr1:57770200-57772000 Weak transcription Primary T helper cells PMA-I stimulated --
3 chr1:57770400-57772600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
4 chr1:57770400-57772600 Enhancers Primary T helper 17 cells PMA-I stimulated --
5 chr1:57770400-57772800 Weak transcription ES-I3 Cell Line embryonic stem cell
6 chr1:57770600-57772600 Genic enhancers Fetal Intestine Large intestine
7 chr1:57770800-57776000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
8 chr1:57771000-57772000 Weak transcription Primary T helper cells fromperipheralblood blood
9 chr1:57771000-57773400 Weak transcription HepG2 liver
10 chr1:57771000-57773800 Enhancers Primary T regulatory cells fromperipheralblood blood
11 chr1:57771200-57772000 Weak transcription Fetal Intestine Small intestine
12 chr1:57771600-57772600 Weak transcription Primary T cells fromperipheralblood blood
13 chr1:57771600-57774000 Enhancers Primary T helper memory cells from peripheral blood 2 blood
14 chr1:57771800-57772600 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
15 chr1:57771800-57773800 Enhancers Primary T helper naive cells from peripheral blood blood
16 chr1:57771800-57773800 Enhancers Primary T killer memory cells from peripheral blood blood
17 chr1:57771800-57774400 Enhancers Primary T helper memory cells from peripheral blood 1 blood

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Last update: Aug 31, 2015