Variant report
| Variant | rs12946143 |
|---|---|
| Chromosome Location | chr17:46154943-46154944 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr17:46132600-46155200 | Strong transcription | Fetal Thymus | thymus |
| 2 | chr17:46133000-46155200 | Strong transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
| 3 | chr17:46133200-46157200 | Strong transcription | Fetal Stomach | stomach |
| 4 | chr17:46133400-46155200 | Strong transcription | Dnd41 | blood |
| 5 | chr17:46135400-46155400 | Weak transcription | ES-WA7 Cell Line | embryonic stem cell |
| 6 | chr17:46137400-46155200 | Strong transcription | Fetal Muscle Trunk | muscle |
| 7 | chr17:46139200-46162600 | Weak transcription | Small Intestine | intestine |
| 8 | chr17:46139800-46162600 | Weak transcription | Primary T helper memory cells from peripheral blood 2 | blood |
| 9 | chr17:46139800-46163600 | Weak transcription | Esophagus | oesophagus |
| 10 | chr17:46140000-46162400 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
| 11 | chr17:46140200-46156400 | Weak transcription | Primary T killer naive cells fromperipheralblood | blood |
| 12 | chr17:46140800-46163200 | Weak transcription | Colonic Mucosa | Colon |
| 13 | chr17:46142600-46162600 | Weak transcription | Fetal Heart | heart |
| 14 | chr17:46143600-46157400 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
| 15 | chr17:46143800-46163200 | Weak transcription | Aorta | Aorta |
| 16 | chr17:46144200-46157000 | Strong transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 17 | chr17:46144400-46163000 | Weak transcription | Psoas Muscle | Psoas |
| 18 | chr17:46144800-46177800 | Weak transcription | Right Ventricle | heart |
| 19 | chr17:46145800-46155200 | Strong transcription | Primary hematopoietic stem cells short term culture | blood |
| 20 | chr17:46146400-46158000 | Strong transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 21 | chr17:46147800-46177600 | Weak transcription | Primary T killer memory cells from peripheral blood | blood |
| 22 | chr17:46148600-46156600 | Strong transcription | Fetal Intestine Small | intestine |
| 23 | chr17:46149000-46178000 | Weak transcription | Lung | lung |
| 24 | chr17:46149200-46162600 | Weak transcription | Hela-S3 | cervix |
| 25 | chr17:46151800-46155200 | Strong transcription | Primary mononuclear cells fromperipheralblood | Blood |
| 26 | chr17:46151800-46157000 | Strong transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 27 | chr17:46152400-46168200 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 28 | chr17:46152400-46177200 | Weak transcription | H9 Cell Line | embryonic stem cell |
| 29 | chr17:46152600-46176800 | Weak transcription | K562 | blood |
| 30 | chr17:46152600-46177000 | Weak transcription | HSMMtube | muscle |
| 31 | chr17:46153400-46170800 | Weak transcription | HSMM | muscle |
| 32 | chr17:46153800-46162600 | Weak transcription | Primary T helper naive cells from peripheral blood | blood |
| 33 | chr17:46153800-46162600 | Weak transcription | Fetal Brain Male | brain |
| 34 | chr17:46153800-46176800 | Weak transcription | NHLF | lung |
| 35 | chr17:46154000-46162200 | Weak transcription | Rectal Smooth Muscle | rectum |
| 36 | chr17:46154000-46162400 | Weak transcription | Colon Smooth Muscle | Colon |
| 37 | chr17:46154000-46163000 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 38 | chr17:46154000-46163200 | Weak transcription | Pancreas | Pancrea |
| 39 | chr17:46154200-46162400 | Weak transcription | Stomach Smooth Muscle | stomach |
| 40 | chr17:46154200-46163000 | Weak transcription | Adipose Nuclei | Adipose |
| 41 | chr17:46154200-46163000 | Weak transcription | Brain Substantia Nigra | brain |
| 42 | chr17:46154200-46163200 | Weak transcription | Primary T cells fromperipheralblood | blood |
| 43 | chr17:46154200-46163600 | Weak transcription | NHDF-Ad | bronchial |
| 44 | chr17:46154200-46176800 | Weak transcription | HMEC | breast |
| 45 | chr17:46154200-46177600 | Weak transcription | Duodenum Mucosa | Duodenum |
| 46 | chr17:46154400-46158000 | Weak transcription | Primary neutrophils fromperipheralblood | blood |
| 47 | chr17:46154400-46162200 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 48 | chr17:46154400-46162200 | Weak transcription | Fetal Kidney | kidney |
| 49 | chr17:46154400-46162400 | Weak transcription | Primary T helper naive cells fromperipheralblood | blood |
| 50 | chr17:46154400-46162600 | Weak transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
