Variant report

Variant rs7212202
Chromosome Location chr17:46132723-46132724
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:46127600-46132800 Genic enhancers Fetal Intestine Small intestine
2 chr17:46127800-46133000 Genic enhancers Fetal Intestine Large intestine
3 chr17:46127800-46133200 Genic enhancers Primary T cells fromperipheralblood blood
4 chr17:46127800-46133200 Genic enhancers Cortex derived primary cultured neurospheres brain
5 chr17:46127800-46133200 Genic enhancers Placenta Placenta
6 chr17:46127800-46133200 Genic enhancers Pancreas Pancrea
7 chr17:46127800-46133400 Genic enhancers Primary Natural Killer cells fromperipheralblood blood
8 chr17:46127800-46133600 Transcr. at gene 5' and 3' Foreskin Keratinocyte Primary Cells skin03 Skin
9 chr17:46128000-46133000 Genic enhancers Sigmoid Colon Sigmoid Colon
10 chr17:46128000-46133200 Genic enhancers Primary T helper naive cells fromperipheralblood blood
11 chr17:46128000-46133800 Transcr. at gene 5' and 3' Foreskin Fibroblast Primary Cells skin01 Skin
12 chr17:46128000-46134000 Transcr. at gene 5' and 3' Foreskin Keratinocyte Primary Cells skin02 Skin
13 chr17:46128000-46134000 Genic enhancers Gastric stomach
14 chr17:46128000-46134000 Genic enhancers Monocytes-CD14+_RO01746 blood
15 chr17:46128000-46134400 Genic enhancers Primary B cells from peripheral blood blood
16 chr17:46128000-46138000 Genic enhancers Spleen Spleen
17 chr17:46128200-46133400 Transcr. at gene 5' and 3' Foreskin Fibroblast Primary Cells skin02 Skin
18 chr17:46128200-46133400 Genic enhancers Lung lung
19 chr17:46128200-46140800 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
20 chr17:46129800-46133200 Enhancers Fetal Brain Male brain
21 chr17:46129800-46133200 Enhancers NHDF-Ad bronchial
22 chr17:46129800-46134000 Genic enhancers IMR90 fetal lung fibroblasts Cell Line lung
23 chr17:46130200-46132800 Flanking Active TSS Brain Anterior Caudate brain
24 chr17:46130200-46133400 Flanking Active TSS Brain Dorsolateral Prefrontal Cortex brain
25 chr17:46130200-46133400 Genic enhancers Dnd41 blood
26 chr17:46130200-46134000 Genic enhancers K562 blood
27 chr17:46130400-46132800 Flanking Active TSS Brain Hippocampus Middle brain
28 chr17:46130400-46154600 Strong transcription Primary T cells from cord blood blood
29 chr17:46130600-46132800 Strong transcription Primary mononuclear cells fromperipheralblood Blood
30 chr17:46130600-46133600 Genic enhancers A549 lung
31 chr17:46130600-46149800 Strong transcription Primary T regulatory cells fromperipheralblood blood
32 chr17:46131000-46133200 Weak transcription Aorta Aorta
33 chr17:46131000-46134600 Weak transcription Primary T killer memory cells from peripheral blood blood
34 chr17:46131000-46145000 Strong transcription Primary hematopoietic stem cells short term culture blood
35 chr17:46131200-46132800 Genic enhancers Duodenum Mucosa Duodenum
36 chr17:46131200-46133000 Active TSS Pancreatic Islets Pancreatic Islet
37 chr17:46131200-46133000 Genic enhancers Rectal Mucosa Donor 31 rectum
38 chr17:46131200-46133200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
39 chr17:46131200-46133400 Genic enhancers HepG2 liver
40 chr17:46131200-46134000 Transcr. at gene 5' and 3' Skeletal Muscle Male skeletal muscle
41 chr17:46131200-46154200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
42 chr17:46131400-46133000 Transcr. at gene 5' and 3' Adipose Nuclei Adipose
43 chr17:46131400-46133000 Enhancers NH-A brain
44 chr17:46131400-46133800 Weak transcription Fetal Kidney kidney
45 chr17:46131400-46134400 Transcr. at gene 5' and 3' Skeletal Muscle Female skeletal muscle
46 chr17:46131400-46151000 Strong transcription Thymus Thymus
47 chr17:46131400-46154400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
48 chr17:46131400-46154400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
49 chr17:46131600-46132800 Active TSS HUES64 Cell Line embryonic stem cell
50 chr17:46131600-46132800 Active TSS iPS-15b Cell Line embryonic stem cell

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