Variant report

Variant	rs875065
Chromosome Location	chr17:46139569-46139570
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:22)
CpG islands
(count:0)
Chromatin interactive
region (count:3)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:22 , 50 per page) page: 1

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	POLR2A	chr17:46138724-46140048	U87	brain:	n/a	n/a
2	POLR2A	chr17:46138940-46139991	HepG2	liver:	n/a	n/a
3	POLR2A	chr17:46137542-46139998	GM12878	blood:	n/a	n/a
4	POLR2A	chr17:46138795-46142780	K562	blood:	n/a	n/a
5	POLR2A	chr17:46139233-46139707	GM12878	blood:	n/a	n/a
6	POLR2A	chr17:46138815-46139606	HepG2	liver:	n/a	n/a
7	POLR2A	chr17:46139387-46139569	HepG2	liver:	n/a	n/a
8	POLR2A	chr17:46139482-46139649	GM12878	blood:	n/a	n/a
9	POLR2A	chr17:46137422-46140045	H1-hESC	embryonic stem cell:	n/a	n/a
10	POLR2A	chr17:46138731-46140210	SK-N-SH	brain:	n/a	n/a
11	POLR2A	chr17:46139298-46139643	MCF-7	breast:	n/a	n/a
12	POLR2A	chr17:46138762-46140082	SK-N-MC	brain:	n/a	n/a
13	POLR2A	chr17:46139296-46139692	GM12878	blood:	n/a	n/a
14	POLR2A	chr17:46139257-46139584	K562	blood:	n/a	n/a
15	POLR2A	chr17:46138760-46139783	PANC-1	pancreas:	n/a	n/a
16	POLR2A	chr17:46138730-46140021	U87	brain:	n/a	n/a
17	POLR2A	chr17:46138849-46139726	Hela-S3	cervix:	n/a	n/a
18	POLR2A	chr17:46139258-46139633	GM12891	blood:	n/a	n/a
19	POLR2A	chr17:46138234-46139578	PFSK-1	brain:	n/a	n/a
20	POLR2A	chr17:46139205-46139749	HL-60	blood:	n/a	n/a
21	POLR2A	chr17:46139128-46139932	HCT-116	colon:	n/a	n/a
22	POLR2A	chr17:46139272-46139907	H1-hESC	embryonic stem cell:	n/a	n/a

No data

(count:3 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr17:46139248..46141644-chr17:46149941..46152183,2	K562	blood:
2	chr17:46138737..46141088-chr17:46142783..46146686,3	K562	blood:
3	chr17:46101105..46103600-chr17:46138734..46141619,2	K562	blood:

No data

Variant related genes	Relation type
ENSG00000266341	TF binding region

Extended variants
information (count: 131 )
Associated
traits (count: 14 )

rSNPs within LD-proxies of this variant (count:129)

rs_ID	r²[population]
rs1010228	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.85[AMR][1000 genomes];0.86[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs1010230	0.83[ASN][1000 genomes]
rs10853094	0.82[EUR][1000 genomes]
rs11079806	0.94[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];0.95[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.98[LWK][hapmap];1.00[MEX][hapmap];0.98[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11079808	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];0.94[MEX][hapmap];0.99[MKK][hapmap];1.00[TSI][hapmap];0.96[YRI][hapmap];0.93[AMR][1000 genomes];0.91[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs11079809	0.90[AMR][1000 genomes];0.84[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs11649919	0.98[AFR][1000 genomes];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11651097	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11655407	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11658242	0.81[MKK][hapmap]
rs11869625	0.83[AMR][1000 genomes]
rs12450620	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12600980	0.91[ASN][1000 genomes]
rs12936731	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12939514	0.82[ASN][1000 genomes]
rs12941295	0.90[AMR][1000 genomes];0.90[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12943543	0.93[AMR][1000 genomes];0.91[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12946143	1.00[ASN][1000 genomes]
rs12947089	0.85[CHB][hapmap];0.81[JPT][hapmap]
rs12949879	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs12950213	0.83[AMR][1000 genomes];0.80[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs12950402	0.93[AMR][1000 genomes];0.91[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12952163	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1316657	0.85[CHB][hapmap];0.81[JPT][hapmap]
rs1452663	1.00[CHB][hapmap];0.93[JPT][hapmap]
rs1452665	1.00[CEU][hapmap];1.00[CHB][hapmap];0.93[JPT][hapmap];1.00[YRI][hapmap]
rs1452666	0.85[CHB][hapmap];0.81[JPT][hapmap]
rs1452667	0.85[CHB][hapmap];0.81[JPT][hapmap]
rs1468270	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.93[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];0.99[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.97[AFR][1000 genomes];0.92[AMR][1000 genomes];0.96[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs16951519	1.00[CHB][hapmap];0.86[CHD][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs16953941	1.00[CHB][hapmap];0.95[CHD][hapmap];0.93[JPT][hapmap]
rs16954268	1.00[CHB][hapmap];0.91[CHD][hapmap];0.93[JPT][hapmap]
rs16954324	1.00[CHB][hapmap];0.93[JPT][hapmap]
rs17620033	0.85[CHB][hapmap];0.81[JPT][hapmap]
rs1860862	0.85[CHB][hapmap];0.87[JPT][hapmap]
rs1860866	0.87[AMR][1000 genomes];0.86[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs1979897	1.00[CHB][hapmap];0.81[JPT][hapmap]
rs2021752	0.85[CHB][hapmap];0.81[JPT][hapmap]
rs2041572	0.85[CHB][hapmap];0.87[JPT][hapmap]
rs2051821	0.94[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.98[LWK][hapmap];1.00[MEX][hapmap];0.98[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.96[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2060876	0.85[CHB][hapmap];0.81[JPT][hapmap]
rs208005	1.00[CHB][hapmap];0.95[CHD][hapmap];0.93[JPT][hapmap]
rs208008	1.00[CHB][hapmap];0.95[CHD][hapmap];0.93[JPT][hapmap]
rs208009	1.00[CHB][hapmap];0.95[CHD][hapmap];0.93[JPT][hapmap]
rs208015	1.00[CHB][hapmap];0.95[CHD][hapmap];0.93[JPT][hapmap]
rs2109982	0.85[CHB][hapmap];0.81[JPT][hapmap]
rs2109983	0.92[CHB][hapmap];1.00[JPT][hapmap];0.83[ASN][1000 genomes]
rs2109984	1.00[ASW][hapmap];0.94[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.93[AMR][1000 genomes];0.91[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2123341	0.85[CHB][hapmap];0.81[JPT][hapmap]
rs2229369	1.00[CHB][hapmap];1.00[JPT][hapmap];0.99[ASN][1000 genomes]
rs2240120	1.00[CHB][hapmap];0.95[CHD][hapmap];0.93[JPT][hapmap];0.97[ASN][1000 genomes]
rs2240121	1.00[CHB][hapmap];0.86[CHD][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs2240122	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];0.91[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];0.94[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap]
rs2278868	0.85[CHB][hapmap];0.81[JPT][hapmap]
rs2285863	1.00[AFR][1000 genomes];0.93[AMR][1000 genomes];0.94[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2305433	0.85[CHB][hapmap];0.81[JPT][hapmap]
rs2325783	1.00[ASN][1000 genomes]
rs2325804	1.00[CHB][hapmap];0.93[JPT][hapmap]
rs35361214	0.98[AFR][1000 genomes];0.95[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35688835	0.90[AMR][1000 genomes];0.90[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs3744346	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.87[AMR][1000 genomes];0.86[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs3744347	0.87[AMR][1000 genomes];0.89[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs3785737	0.87[ASN][1000 genomes]
rs3792692	0.85[CHB][hapmap];0.81[JPT][hapmap]
rs3792694	0.85[CHB][hapmap];0.81[JPT][hapmap]
rs3805370	0.84[CHB][hapmap]
rs3897986	0.85[CHB][hapmap];0.81[JPT][hapmap]
rs4793779	0.83[CHB][hapmap]
rs4794441	0.93[AMR][1000 genomes];0.91[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs4794447	0.83[CHB][hapmap];0.81[JPT][hapmap]
rs4794448	0.93[AMR][1000 genomes];0.91[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs4794449	0.93[AMR][1000 genomes];0.91[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs4794450	0.86[AMR][1000 genomes];0.86[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs4794451	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.93[AMR][1000 genomes];0.91[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs4794453	0.93[AMR][1000 genomes];0.91[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs4995899	1.00[ASN][1000 genomes]
rs55920502	1.00[ASN][1000 genomes]
rs58203448	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs58595405	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs58624511	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs62064953	0.88[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs6504024	0.97[AFR][1000 genomes];0.97[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6504025	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[YRI][hapmap];0.98[AFR][1000 genomes];0.97[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6504031	0.93[AMR][1000 genomes];0.91[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs6504032	0.89[AMR][1000 genomes];0.90[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs6504108	0.85[CHB][hapmap];0.81[JPT][hapmap]
rs6847	1.00[ASW][hapmap];1.00[CEU][hapmap];0.92[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs71356520	0.81[ASN][1000 genomes]
rs71369829	0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7209585	0.93[AMR][1000 genomes];0.90[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7209730	0.87[AMR][1000 genomes];0.86[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs7212202	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7213339	0.84[AMR][1000 genomes];0.81[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs7217496	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7218700	0.85[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs7220520	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.87[JPT][hapmap];1.00[LWK][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.81[AFR][1000 genomes];0.93[AMR][1000 genomes];0.90[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7220768	0.85[CHB][hapmap];0.81[JPT][hapmap]
rs7221441	0.81[AFR][1000 genomes];0.92[AMR][1000 genomes];0.85[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7222136	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.87[AMR][1000 genomes];0.85[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs7222646	0.87[MKK][hapmap]
rs7223867	0.85[CHB][hapmap];0.86[JPT][hapmap]
rs7224014	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7224461	1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[ASN][1000 genomes]
rs7225550	0.85[CHB][hapmap];0.81[JPT][hapmap]
rs741058	0.83[ASN][1000 genomes]
rs758999	0.85[CHB][hapmap];0.87[JPT][hapmap]
rs8065670	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.93[AMR][1000 genomes];0.91[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs8065993	0.89[AMR][1000 genomes];0.91[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs8066049	0.84[ASN][1000 genomes]
rs8066391	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.90[AMR][1000 genomes];0.88[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs8069263	0.85[CHB][hapmap];0.81[JPT][hapmap]
rs8069889	0.84[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs8071199	1.00[CHB][hapmap];0.95[CHD][hapmap];1.00[JPT][hapmap];0.89[ASN][1000 genomes]
rs8071879	1.00[CHB][hapmap];0.95[CHD][hapmap];0.93[JPT][hapmap]
rs8072282	0.85[CHB][hapmap];0.81[JPT][hapmap]
rs8075500	0.92[AMR][1000 genomes];0.91[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs8076380	0.86[AMR][1000 genomes];0.90[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs8077860	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];0.98[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.90[AMR][1000 genomes];0.91[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs8078125	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8080662	0.90[AMR][1000 genomes];0.90[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs875066	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9747001	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs978263	1.00[CHB][hapmap];1.00[JPT][hapmap];0.91[ASN][1000 genomes]
rs9807087	0.87[AMR][1000 genomes];0.86[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs9890691	0.91[ASN][1000 genomes]
rs9899275	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs9899461	0.88[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];0.97[TSI][hapmap];1.00[YRI][hapmap];0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs9905800	0.81[MKK][hapmap]
rs9910516	0.92[AMR][1000 genomes];0.86[EUR][1000 genomes];0.91[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv469808	chr17:46049868-46228673	Enhancers Weak transcription Bivalent/Poised TSS Strong transcription Bivalent Enhancer Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	85 gene(s)	inside rSNPs	diseases
2	nsv482897	chr17:46049868-46228673	Enhancers Active TSS Weak transcription Strong transcription Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	85 gene(s)	inside rSNPs	diseases

mRNA abundance (count:14)

SNP	Gene	Cis/trans	Tissue	Source
rs875065	CBX1	cis	cerebellum	SCAN
rs875065	RPL27	cis	cerebellum	SCAN
rs875065	DCAKD	cis	cerebellum	SCAN
rs875065	SNX11	cis	cerebellum	SCAN
rs875065	PNPO	Cis_1M	lymphoblastoid	RTeQTL
rs875065	SNX11	cis	Skin Sun Exposed Lower leg	GTEx
rs875065	RUNDC1	cis	cerebellum	SCAN
rs875065	NFE2L1	cis	cerebellum	SCAN
rs875065	SNX11	cis	lymphoblastoid	seeQTL
rs875065	KAT2A	cis	parietal	SCAN
rs875065	SNX11	cis	Whole Blood	GTEx
rs875065	SNX11	cis	parietal	SCAN
rs875065	TUBG1	cis	parietal	SCAN
rs875065	CBX1	Cis_1M	lymphoblastoid	RTeQTL

Chromatin state (count:127 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr17:46128200-46140800	Strong transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
2	chr17:46130400-46154600	Strong transcription	Primary T cells from cord blood	blood
3	chr17:46130600-46149800	Strong transcription	Primary T regulatory cells fromperipheralblood	blood
4	chr17:46131000-46145000	Strong transcription	Primary hematopoietic stem cells short term culture	blood
5	chr17:46131200-46154200	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
6	chr17:46131400-46151000	Strong transcription	Thymus	Thymus
7	chr17:46131400-46154400	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
8	chr17:46131400-46154400	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
9	chr17:46132600-46148000	Strong transcription	Primary hematopoietic stem cells	blood
10	chr17:46132600-46155200	Strong transcription	Fetal Thymus	thymus
11	chr17:46132800-46143800	Strong transcription	Rectal Smooth Muscle	rectum
12	chr17:46132800-46145600	Strong transcription	Fetal Intestine Small	intestine
13	chr17:46133000-46140400	Strong transcription	NHLF	lung
14	chr17:46133000-46144400	Strong transcription	Rectal Mucosa Donor 31	rectum
15	chr17:46133000-46145000	Strong transcription	Sigmoid Colon	Sigmoid Colon
16	chr17:46133000-46145600	Strong transcription	Fetal Intestine Large	intestine
17	chr17:46133000-46154600	Strong transcription	Fetal Brain Female	brain
18	chr17:46133000-46155200	Strong transcription	Ganglion Eminence derived primary cultured neurospheres	brain
19	chr17:46133200-46139600	Strong transcription	Fetal Lung	lung
20	chr17:46133200-46139800	Strong transcription	Primary T helper memory cells from peripheral blood 2	blood
21	chr17:46133200-46139800	Strong transcription	Aorta	Aorta
22	chr17:46133200-46139800	Strong transcription	Pancreas	Pancrea
23	chr17:46133200-46140800	Strong transcription	Primary T helper naive cells fromperipheralblood	blood
24	chr17:46133200-46143400	Strong transcription	Cortex derived primary cultured neurospheres	brain
25	chr17:46133200-46143600	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
26	chr17:46133200-46143800	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
27	chr17:46133200-46149400	Strong transcription	Primary T cells fromperipheralblood	blood
28	chr17:46133200-46157200	Strong transcription	Fetal Stomach	stomach
29	chr17:46133400-46140000	Strong transcription	Primary T helper 17 cells PMA-I stimulated	--
30	chr17:46133400-46140000	Strong transcription	Brain Substantia Nigra	brain
31	chr17:46133400-46140000	Strong transcription	Placenta Amnion	Placenta Amnion
32	chr17:46133400-46140800	Strong transcription	Colonic Mucosa	Colon
33	chr17:46133400-46141400	Strong transcription	Fetal Muscle Leg	muscle
34	chr17:46133400-46141400	Strong transcription	HepG2	liver
35	chr17:46133400-46142400	Strong transcription	Brain Hippocampus Middle	brain
36	chr17:46133400-46142600	Strong transcription	Colon Smooth Muscle	Colon
37	chr17:46133400-46144400	Strong transcription	Brain Inferior Temporal Lobe	brain
38	chr17:46133400-46149800	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
39	chr17:46133400-46150600	Strong transcription	Primary T helper cells fromperipheralblood	blood
40	chr17:46133400-46151000	Strong transcription	Primary mononuclear cells fromperipheralblood	Blood
41	chr17:46133400-46154400	Strong transcription	Brain Germinal Matrix	brain
42	chr17:46133400-46154400	Strong transcription	Rectal Mucosa Donor 29	rectum
43	chr17:46133400-46154600	Strong transcription	Primary T helper cells PMA-I stimulated	--
44	chr17:46133400-46155200	Strong transcription	Dnd41	blood
45	chr17:46133600-46141600	Strong transcription	HMEC	breast
46	chr17:46133600-46144800	Strong transcription	A549	lung
47	chr17:46133600-46149400	Strong transcription	Duodenum Mucosa	Duodenum
48	chr17:46133600-46151400	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
49	chr17:46133600-46154400	Strong transcription	Primary neutrophils fromperipheralblood	blood
50	chr17:46133600-46154400	Strong transcription	Duodenum Smooth Muscle	Duodenum

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