The 2.0 version of rSNPBase

Variant report

Variant rs1327643
Chromosome Location chr13:30348685-30348686
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:73 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:30328800-30351800 Weak transcription NH-A brain
2 chr13:30328800-30352600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
3 chr13:30329200-30351200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
4 chr13:30330600-30355000 Weak transcription Rectal Smooth Muscle rectum
5 chr13:30333200-30353800 Weak transcription Gastric stomach
6 chr13:30333200-30360200 Weak transcription Pancreas Pancrea
7 chr13:30333200-30368200 Weak transcription Aorta Aorta
8 chr13:30333400-30357000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
9 chr13:30333600-30376200 Weak transcription Primary hematopoietic stem cells blood
10 chr13:30335200-30356800 Weak transcription GM12878-XiMat blood
11 chr13:30335400-30349800 Weak transcription Fetal Stomach stomach
12 chr13:30336400-30357000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
13 chr13:30336600-30353800 Weak transcription Psoas Muscle Psoas
14 chr13:30337600-30363000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
15 chr13:30337800-30359800 Weak transcription HMEC breast
16 chr13:30338400-30354000 Weak transcription Colon Smooth Muscle Colon
17 chr13:30338400-30360000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
18 chr13:30338400-30360000 Weak transcription Sigmoid Colon Sigmoid Colon
19 chr13:30338600-30357000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
20 chr13:30339000-30360200 Weak transcription Primary T helper naive cells fromperipheralblood blood
21 chr13:30339000-30364200 Weak transcription Primary T killer naive cells fromperipheralblood blood
22 chr13:30339400-30350800 Weak transcription Hela-S3 cervix
23 chr13:30339600-30349600 Weak transcription Placenta Amnion Placenta Amnion
24 chr13:30341200-30373200 Weak transcription HUES6 Cell Line embryonic stem cell
25 chr13:30341400-30349600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
26 chr13:30341400-30352200 Weak transcription Stomach Smooth Muscle stomach
27 chr13:30341400-30360200 Weak transcription Duodenum Smooth Muscle Duodenum
28 chr13:30341600-30349800 Weak transcription Fetal Lung lung
29 chr13:30341600-30353000 Weak transcription Fetal Intestine Large intestine
30 chr13:30341600-30356800 Weak transcription Primary T helper naive cells from peripheral blood blood
31 chr13:30341600-30357200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
32 chr13:30341600-30360200 Weak transcription Skeletal Muscle Female skeletal muscle
33 chr13:30341800-30349000 Weak transcription Primary T helper cells fromperipheralblood blood
34 chr13:30341800-30350600 Weak transcription Fetal Muscle Trunk muscle
35 chr13:30341800-30351000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
36 chr13:30341800-30353800 Weak transcription Primary B cells from peripheral blood blood
37 chr13:30341800-30354000 Weak transcription Cortex derived primary cultured neurospheres brain
38 chr13:30341800-30354400 Weak transcription Adipose Nuclei Adipose
39 chr13:30341800-30359800 Weak transcription Duodenum Mucosa Duodenum
40 chr13:30341800-30360200 Weak transcription Left Ventricle heart
41 chr13:30341800-30360400 Weak transcription Fetal Adrenal Gland Adrenal Gland
42 chr13:30341800-30363600 Weak transcription HSMM muscle
43 chr13:30341800-30365000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
44 chr13:30342000-30349800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
45 chr13:30342000-30351800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
46 chr13:30342000-30356800 Weak transcription Primary T helper cells PMA-I stimulated --
47 chr13:30342000-30357000 Weak transcription NHDF-Ad bronchial
48 chr13:30342000-30359800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
49 chr13:30342600-30350800 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
50 chr13:30343400-30356600 Weak transcription Liver Liver

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Last update: Aug 31, 2015