The 2.0 version of rSNPBase

Variant report

Variant rs7983788
Chromosome Location chr13:30335747-30335748
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:58 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:30317600-30335800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
2 chr13:30324600-30340400 Weak transcription Adipose Nuclei Adipose
3 chr13:30326600-30343200 Weak transcription Spleen Spleen
4 chr13:30328400-30337200 Weak transcription Osteobl bone
5 chr13:30328400-30340600 Weak transcription NHLF lung
6 chr13:30328600-30337200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
7 chr13:30328600-30341200 Weak transcription iPS-18 Cell Line embryonic stem cell
8 chr13:30328800-30337200 Weak transcription NHDF-Ad bronchial
9 chr13:30328800-30337400 Weak transcription Muscle Satellite Cultured Cells --
10 chr13:30328800-30340400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
11 chr13:30328800-30340400 Weak transcription Brain Hippocampus Middle brain
12 chr13:30328800-30340800 Weak transcription HUES48 Cell Line embryonic stem cell
13 chr13:30328800-30347800 Weak transcription Fetal Kidney kidney
14 chr13:30328800-30351800 Weak transcription NH-A brain
15 chr13:30328800-30352600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
16 chr13:30329000-30335800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
17 chr13:30329200-30338000 Weak transcription Sigmoid Colon Sigmoid Colon
18 chr13:30329200-30340000 Weak transcription HUES64 Cell Line embryonic stem cell
19 chr13:30329200-30340600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
20 chr13:30329200-30351200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
21 chr13:30330600-30355000 Weak transcription Rectal Smooth Muscle rectum
22 chr13:30332200-30336200 Weak transcription HSMMtube muscle
23 chr13:30332800-30336400 Enhancers Primary B cells from peripheral blood blood
24 chr13:30333000-30340600 Weak transcription Fetal Thymus thymus
25 chr13:30333000-30340600 Weak transcription Thymus Thymus
26 chr13:30333200-30338000 Weak transcription Rectal Mucosa Donor 31 rectum
27 chr13:30333200-30338400 Weak transcription Stomach Mucosa stomach
28 chr13:30333200-30338800 Weak transcription HSMM muscle
29 chr13:30333200-30340200 Weak transcription Primary T regulatory cells fromperipheralblood blood
30 chr13:30333200-30340600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
31 chr13:30333200-30353800 Weak transcription Gastric stomach
32 chr13:30333200-30360200 Weak transcription Pancreas Pancrea
33 chr13:30333200-30368200 Weak transcription Aorta Aorta
34 chr13:30333400-30337000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
35 chr13:30333400-30337200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
36 chr13:30333400-30337400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
37 chr13:30333400-30338000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
38 chr13:30333400-30340400 Weak transcription Duodenum Mucosa Duodenum
39 chr13:30333400-30340600 Weak transcription Placenta Placenta
40 chr13:30333400-30345800 Weak transcription HepG2 liver
41 chr13:30333400-30357000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
42 chr13:30333600-30337800 Weak transcription Primary T killer memory cells from peripheral blood blood
43 chr13:30333600-30338000 Weak transcription Primary B cells from cord blood blood
44 chr13:30333600-30340000 Weak transcription Primary neutrophils fromperipheralblood blood
45 chr13:30333600-30340400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
46 chr13:30333600-30340600 Weak transcription Primary hematopoietic stem cells short term culture blood
47 chr13:30333600-30376200 Weak transcription Primary hematopoietic stem cells blood
48 chr13:30333800-30336400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
49 chr13:30333800-30337200 Weak transcription Primary T helper cells PMA-I stimulated --
50 chr13:30334800-30340800 Weak transcription Fetal Muscle Trunk muscle

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Last update: Aug 31, 2015