The 2.0 version of rSNPBase

Variant report

Variant rs1747063
Chromosome Location chr13:30411841-30411842
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:65 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:30376600-30420600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
2 chr13:30392000-30415600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
3 chr13:30394200-30413400 Weak transcription Primary hematopoietic stem cells blood
4 chr13:30404400-30420000 Weak transcription Cortex derived primary cultured neurospheres brain
5 chr13:30404600-30415800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
6 chr13:30404800-30415600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
7 chr13:30404800-30418200 Weak transcription HSMM muscle
8 chr13:30405200-30415800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
9 chr13:30405400-30419200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
10 chr13:30405600-30414800 Weak transcription iPS-15b Cell Line embryonic stem cell
11 chr13:30406000-30415000 Weak transcription NHEK skin
12 chr13:30406000-30419600 Weak transcription Monocytes-CD14+_RO01746 blood
13 chr13:30406200-30417800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
14 chr13:30407200-30414200 Weak transcription Hela-S3 cervix
15 chr13:30407200-30415800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
16 chr13:30407400-30412200 Weak transcription Primary T cells from cord blood blood
17 chr13:30407400-30415800 Weak transcription Gastric stomach
18 chr13:30407400-30419200 Weak transcription Fetal Intestine Small intestine
19 chr13:30407400-30419400 Weak transcription Brain Angular Gyrus brain
20 chr13:30407400-30419800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
21 chr13:30407400-30419800 Weak transcription Duodenum Smooth Muscle Duodenum
22 chr13:30407400-30420800 Weak transcription Sigmoid Colon Sigmoid Colon
23 chr13:30407600-30415800 Weak transcription Pancreatic Islets Pancreatic Islet
24 chr13:30407600-30418400 Weak transcription Skeletal Muscle Male skeletal muscle
25 chr13:30407800-30414200 Weak transcription iPS-18 Cell Line embryonic stem cell
26 chr13:30407800-30418600 Weak transcription Brain Substantia Nigra brain
27 chr13:30408200-30415800 Weak transcription Pancreas Pancrea
28 chr13:30408200-30420800 Weak transcription Right Atrium heart
29 chr13:30408400-30415800 Weak transcription Aorta Aorta
30 chr13:30408400-30415800 Weak transcription Placenta Amnion Placenta Amnion
31 chr13:30409600-30412200 Weak transcription Primary T killer memory cells from peripheral blood blood
32 chr13:30409600-30413400 Enhancers Primary T killer naive cells fromperipheralblood blood
33 chr13:30409800-30421600 Weak transcription Left Ventricle heart
34 chr13:30410000-30415800 Weak transcription H1 Cell Line embryonic stem cell
35 chr13:30410000-30420000 Enhancers Primary T helper cells PMA-I stimulated --
36 chr13:30410200-30414600 Weak transcription iPS-20b Cell Line embryonic stem cell
37 chr13:30410200-30415600 Weak transcription GM12878-XiMat blood
38 chr13:30410600-30412600 Enhancers Primary T helper cells fromperipheralblood blood
39 chr13:30410600-30413000 Enhancers Primary T helper 17 cells PMA-I stimulated --
40 chr13:30410600-30413800 Enhancers Primary T regulatory cells fromperipheralblood blood
41 chr13:30410600-30413800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
42 chr13:30410800-30415800 Weak transcription Primary B cells from peripheral blood blood
43 chr13:30411000-30414200 Weak transcription Brain Anterior Caudate brain
44 chr13:30411000-30414800 Weak transcription Brain Hippocampus Middle brain
45 chr13:30411000-30415800 Weak transcription Thymus Thymus
46 chr13:30411000-30420800 Weak transcription Ovary ovary
47 chr13:30411200-30412200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
48 chr13:30411200-30412400 Weak transcription HUES48 Cell Line embryonic stem cell
49 chr13:30411200-30412800 Weak transcription Breast Myoepithelial Primary Cells Breast
50 chr13:30411200-30414400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived

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Last update: Aug 31, 2015