The 2.0 version of rSNPBase

Variant report

Variant rs9550492
Chromosome Location chr13:30337761-30337762
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:83 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:30324600-30340400 Weak transcription Adipose Nuclei Adipose
2 chr13:30326600-30343200 Weak transcription Spleen Spleen
3 chr13:30328400-30340600 Weak transcription NHLF lung
4 chr13:30328600-30341200 Weak transcription iPS-18 Cell Line embryonic stem cell
5 chr13:30328800-30340400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
6 chr13:30328800-30340400 Weak transcription Brain Hippocampus Middle brain
7 chr13:30328800-30340800 Weak transcription HUES48 Cell Line embryonic stem cell
8 chr13:30328800-30347800 Weak transcription Fetal Kidney kidney
9 chr13:30328800-30351800 Weak transcription NH-A brain
10 chr13:30328800-30352600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
11 chr13:30329200-30338000 Weak transcription Sigmoid Colon Sigmoid Colon
12 chr13:30329200-30340000 Weak transcription HUES64 Cell Line embryonic stem cell
13 chr13:30329200-30340600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
14 chr13:30329200-30351200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
15 chr13:30330600-30355000 Weak transcription Rectal Smooth Muscle rectum
16 chr13:30333000-30340600 Weak transcription Fetal Thymus thymus
17 chr13:30333000-30340600 Weak transcription Thymus Thymus
18 chr13:30333200-30338000 Weak transcription Rectal Mucosa Donor 31 rectum
19 chr13:30333200-30338400 Weak transcription Stomach Mucosa stomach
20 chr13:30333200-30338800 Weak transcription HSMM muscle
21 chr13:30333200-30340200 Weak transcription Primary T regulatory cells fromperipheralblood blood
22 chr13:30333200-30340600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
23 chr13:30333200-30353800 Weak transcription Gastric stomach
24 chr13:30333200-30360200 Weak transcription Pancreas Pancrea
25 chr13:30333200-30368200 Weak transcription Aorta Aorta
26 chr13:30333400-30338000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
27 chr13:30333400-30340400 Weak transcription Duodenum Mucosa Duodenum
28 chr13:30333400-30340600 Weak transcription Placenta Placenta
29 chr13:30333400-30345800 Weak transcription HepG2 liver
30 chr13:30333400-30357000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
31 chr13:30333600-30337800 Weak transcription Primary T killer memory cells from peripheral blood blood
32 chr13:30333600-30338000 Weak transcription Primary B cells from cord blood blood
33 chr13:30333600-30340000 Weak transcription Primary neutrophils fromperipheralblood blood
34 chr13:30333600-30340400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
35 chr13:30333600-30340600 Weak transcription Primary hematopoietic stem cells short term culture blood
36 chr13:30333600-30376200 Weak transcription Primary hematopoietic stem cells blood
37 chr13:30334800-30340800 Weak transcription Fetal Muscle Trunk muscle
38 chr13:30335200-30356800 Weak transcription GM12878-XiMat blood
39 chr13:30335400-30338000 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
40 chr13:30335400-30338200 Strong transcription Cortex derived primary cultured neurospheres brain
41 chr13:30335400-30349800 Weak transcription Fetal Stomach stomach
42 chr13:30335600-30337800 Weak transcription Monocytes-CD14+_RO01746 blood
43 chr13:30335600-30338000 Weak transcription Fetal Muscle Leg muscle
44 chr13:30335600-30340600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
45 chr13:30335800-30337800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
46 chr13:30335800-30340600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
47 chr13:30336000-30340600 Weak transcription Left Ventricle heart
48 chr13:30336000-30343000 Weak transcription Rectal Mucosa Donor 29 rectum
49 chr13:30336200-30339000 Enhancers Primary T cells from cord blood blood
50 chr13:30336200-30339000 Enhancers Primary T killer naive cells fromperipheralblood blood

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Last update: Aug 31, 2015