The 2.0 version of rSNPBase

Variant report

Variant rs1747058
Chromosome Location chr13:30406324-30406325
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:53 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:30376600-30420600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
2 chr13:30385800-30406800 Weak transcription Pancreas Pancrea
3 chr13:30385800-30410600 Weak transcription Small Intestine intestine
4 chr13:30391200-30410600 Weak transcription Ovary ovary
5 chr13:30392000-30415600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
6 chr13:30393800-30406800 Weak transcription Primary T cells from cord blood blood
7 chr13:30393800-30406800 Weak transcription Colon Smooth Muscle Colon
8 chr13:30394000-30410600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
9 chr13:30394200-30413400 Weak transcription Primary hematopoietic stem cells blood
10 chr13:30394400-30407600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
11 chr13:30394400-30410600 Weak transcription Primary T helper cells fromperipheralblood blood
12 chr13:30398600-30407000 Weak transcription Brain Hippocampus Middle brain
13 chr13:30402000-30409400 Weak transcription Primary B cells from cord blood blood
14 chr13:30403000-30406800 Weak transcription Psoas Muscle Psoas
15 chr13:30403200-30407000 Weak transcription Gastric stomach
16 chr13:30403400-30406800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
17 chr13:30403600-30406800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
18 chr13:30404400-30408400 Enhancers Placenta Amnion Placenta Amnion
19 chr13:30404400-30420000 Weak transcription Cortex derived primary cultured neurospheres brain
20 chr13:30404600-30415800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
21 chr13:30404800-30406800 Weak transcription Brain Cingulate Gyrus brain
22 chr13:30404800-30407000 Weak transcription Breast Myoepithelial Primary Cells Breast
23 chr13:30404800-30415600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
24 chr13:30404800-30418200 Weak transcription HSMM muscle
25 chr13:30405000-30407200 Weak transcription Pancreatic Islets Pancreatic Islet
26 chr13:30405000-30410600 Weak transcription Osteobl bone
27 chr13:30405200-30406800 Weak transcription Liver Liver
28 chr13:30405200-30406800 Weak transcription Stomach Mucosa stomach
29 chr13:30405200-30407000 Weak transcription Duodenum Smooth Muscle Duodenum
30 chr13:30405200-30408800 Weak transcription Primary T killer memory cells from peripheral blood blood
31 chr13:30405200-30409400 Weak transcription Adipose Nuclei Adipose
32 chr13:30405200-30409400 Weak transcription Brain Anterior Caudate brain
33 chr13:30405200-30410000 Weak transcription Primary T helper naive cells from peripheral blood blood
34 chr13:30405200-30415800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
35 chr13:30405400-30406800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
36 chr13:30405400-30410600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
37 chr13:30405400-30419200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
38 chr13:30405600-30406800 Weak transcription Primary T cells fromperipheralblood blood
39 chr13:30405600-30407000 Weak transcription Left Ventricle heart
40 chr13:30405600-30407800 Weak transcription Primary T killer naive cells fromperipheralblood blood
41 chr13:30405600-30414800 Weak transcription iPS-15b Cell Line embryonic stem cell
42 chr13:30405800-30408400 Enhancers Primary T regulatory cells fromperipheralblood blood
43 chr13:30406000-30407000 Weak transcription Hela-S3 cervix
44 chr13:30406000-30407600 Weak transcription Primary T helper cells PMA-I stimulated --
45 chr13:30406000-30415000 Weak transcription NHEK skin
46 chr13:30406000-30419600 Weak transcription Monocytes-CD14+_RO01746 blood
47 chr13:30406200-30407200 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
48 chr13:30406200-30407400 Enhancers Fetal Intestine Small intestine
49 chr13:30406200-30407400 Enhancers Sigmoid Colon Sigmoid Colon
50 chr13:30406200-30408000 Enhancers Fetal Intestine Large intestine

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Last update: Aug 31, 2015