Variant report

Variant rs278033
Chromosome Location chr13:30416962-30416963
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:82 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:30376600-30420600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
2 chr13:30404400-30420000 Weak transcription Cortex derived primary cultured neurospheres brain
3 chr13:30404800-30418200 Weak transcription HSMM muscle
4 chr13:30405400-30419200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
5 chr13:30406000-30419600 Weak transcription Monocytes-CD14+_RO01746 blood
6 chr13:30406200-30417800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
7 chr13:30407400-30419200 Weak transcription Fetal Intestine Small intestine
8 chr13:30407400-30419400 Weak transcription Brain Angular Gyrus brain
9 chr13:30407400-30419800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
10 chr13:30407400-30419800 Weak transcription Duodenum Smooth Muscle Duodenum
11 chr13:30407400-30420800 Weak transcription Sigmoid Colon Sigmoid Colon
12 chr13:30407600-30418400 Weak transcription Skeletal Muscle Male skeletal muscle
13 chr13:30407800-30418600 Weak transcription Brain Substantia Nigra brain
14 chr13:30408200-30420800 Weak transcription Right Atrium heart
15 chr13:30409800-30421600 Weak transcription Left Ventricle heart
16 chr13:30410000-30420000 Enhancers Primary T helper cells PMA-I stimulated --
17 chr13:30411000-30420800 Weak transcription Ovary ovary
18 chr13:30411200-30418200 Weak transcription Osteobl bone
19 chr13:30411200-30418600 Weak transcription Adipose Nuclei Adipose
20 chr13:30412000-30421000 Enhancers Primary T helper memory cells from peripheral blood 1 blood
21 chr13:30413200-30420600 Weak transcription Rectal Mucosa Donor 31 rectum
22 chr13:30413800-30420400 Weak transcription Primary T killer memory cells from peripheral blood blood
23 chr13:30414400-30418200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
24 chr13:30414600-30417600 Weak transcription Brain Anterior Caudate brain
25 chr13:30414800-30417400 Enhancers Brain Hippocampus Middle brain
26 chr13:30414800-30418600 Enhancers Primary T regulatory cells fromperipheralblood blood
27 chr13:30414800-30420400 Enhancers Primary T killer naive cells fromperipheralblood blood
28 chr13:30414800-30420800 Enhancers Primary T helper memory cells from peripheral blood 2 blood
29 chr13:30415200-30417400 Enhancers Liver Liver
30 chr13:30415200-30418200 Weak transcription NHLF lung
31 chr13:30415400-30420800 Weak transcription Fetal Kidney kidney
32 chr13:30415600-30417200 Enhancers Breast Myoepithelial Primary Cells Breast
33 chr13:30415600-30417200 Enhancers Primary T cells from cord blood blood
34 chr13:30415600-30417200 Enhancers Colon Smooth Muscle Colon
35 chr13:30415800-30417000 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
36 chr13:30415800-30417000 Enhancers Stomach Mucosa stomach
37 chr13:30415800-30418200 Enhancers Pancreatic Islets Pancreatic Islet
38 chr13:30415800-30419600 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
39 chr13:30415800-30420000 Weak transcription Fetal Brain Male brain
40 chr13:30415800-30421000 Weak transcription HMEC breast
41 chr13:30416000-30417000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
42 chr13:30416000-30417000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
43 chr13:30416000-30417200 Enhancers GM12878-XiMat blood
44 chr13:30416000-30418400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
45 chr13:30416000-30418600 Weak transcription NHEK skin
46 chr13:30416000-30419200 Weak transcription Rectal Smooth Muscle rectum
47 chr13:30416200-30417000 Weak transcription Placenta Amnion Placenta Amnion
48 chr13:30416200-30417200 Enhancers HUES6 Cell Line embryonic stem cell
49 chr13:30416200-30417400 Enhancers ES-I3 Cell Line embryonic stem cell
50 chr13:30416200-30417400 Enhancers iPS-15b Cell Line embryonic stem cell

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