The 2.0 version of rSNPBase

Variant report

Variant rs74044752
Chromosome Location chr13:30388577-30388578
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:52 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:30376600-30420600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
2 chr13:30377400-30390000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
3 chr13:30378000-30391800 Weak transcription iPS-18 Cell Line embryonic stem cell
4 chr13:30381600-30390600 Weak transcription Primary B cells from peripheral blood blood
5 chr13:30382600-30388800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
6 chr13:30382600-30390800 Weak transcription Primary T helper naive cells from peripheral blood blood
7 chr13:30383600-30389200 Weak transcription Primary T killer memory cells from peripheral blood blood
8 chr13:30384800-30389600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
9 chr13:30385000-30391400 Weak transcription Osteobl bone
10 chr13:30385200-30389200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
11 chr13:30385200-30391200 Weak transcription Rectal Smooth Muscle rectum
12 chr13:30385400-30389400 Weak transcription Colon Smooth Muscle Colon
13 chr13:30385600-30390400 Weak transcription GM12878-XiMat blood
14 chr13:30385600-30391400 Weak transcription Brain Germinal Matrix brain
15 chr13:30385800-30388600 Weak transcription Left Ventricle heart
16 chr13:30385800-30389600 Weak transcription Brain Anterior Caudate brain
17 chr13:30385800-30390600 Weak transcription Gastric stomach
18 chr13:30385800-30390600 Weak transcription Psoas Muscle Psoas
19 chr13:30385800-30391200 Weak transcription Duodenum Mucosa Duodenum
20 chr13:30385800-30391800 Weak transcription Breast Myoepithelial Primary Cells Breast
21 chr13:30385800-30403000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
22 chr13:30385800-30406800 Weak transcription Pancreas Pancrea
23 chr13:30385800-30410600 Weak transcription Small Intestine intestine
24 chr13:30386000-30389200 Weak transcription Primary T helper cells PMA-I stimulated --
25 chr13:30386000-30390600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
26 chr13:30386000-30390600 Weak transcription Sigmoid Colon Sigmoid Colon
27 chr13:30386000-30391000 Weak transcription Skeletal Muscle Male skeletal muscle
28 chr13:30386000-30391000 Weak transcription Skeletal Muscle Female skeletal muscle
29 chr13:30386000-30391400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
30 chr13:30386000-30406200 Weak transcription Fetal Intestine Small intestine
31 chr13:30386200-30391000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
32 chr13:30386200-30392200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
33 chr13:30386400-30390400 Weak transcription Primary T helper naive cells fromperipheralblood blood
34 chr13:30386400-30390600 Weak transcription Ovary ovary
35 chr13:30386600-30389600 Weak transcription Pancreatic Islets Pancreatic Islet
36 chr13:30386600-30391000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
37 chr13:30386800-30391200 Weak transcription Liver Liver
38 chr13:30386800-30394000 Weak transcription Stomach Mucosa stomach
39 chr13:30387200-30390400 Enhancers Brain Hippocampus Middle brain
40 chr13:30387600-30389000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
41 chr13:30387600-30393600 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
42 chr13:30388000-30388600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
43 chr13:30388000-30390600 Weak transcription Primary T regulatory cells fromperipheralblood blood
44 chr13:30388200-30388600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
45 chr13:30388200-30389000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
46 chr13:30388200-30389200 Weak transcription Brain Inferior Temporal Lobe brain
47 chr13:30388200-30389200 Weak transcription Brain Substantia Nigra brain
48 chr13:30388200-30389600 Weak transcription Brain Cingulate Gyrus brain
49 chr13:30388200-30391200 Weak transcription Primary T helper cells fromperipheralblood blood
50 chr13:30388200-30391400 Weak transcription Duodenum Smooth Muscle Duodenum

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Last update: Aug 31, 2015