The 2.0 version of rSNPBase

Variant report

Variant rs2761936
Chromosome Location chr13:30405790-30405791
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:46 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:30376600-30420600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
2 chr13:30385800-30406800 Weak transcription Pancreas Pancrea
3 chr13:30385800-30410600 Weak transcription Small Intestine intestine
4 chr13:30386000-30406200 Weak transcription Fetal Intestine Small intestine
5 chr13:30391200-30410600 Weak transcription Ovary ovary
6 chr13:30392000-30415600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
7 chr13:30393800-30406800 Weak transcription Primary T cells from cord blood blood
8 chr13:30393800-30406800 Weak transcription Colon Smooth Muscle Colon
9 chr13:30394000-30410600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
10 chr13:30394200-30413400 Weak transcription Primary hematopoietic stem cells blood
11 chr13:30394400-30407600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
12 chr13:30394400-30410600 Weak transcription Primary T helper cells fromperipheralblood blood
13 chr13:30397000-30405800 Weak transcription Primary T regulatory cells fromperipheralblood blood
14 chr13:30398600-30407000 Weak transcription Brain Hippocampus Middle brain
15 chr13:30402000-30409400 Weak transcription Primary B cells from cord blood blood
16 chr13:30403000-30406800 Weak transcription Psoas Muscle Psoas
17 chr13:30403200-30407000 Weak transcription Gastric stomach
18 chr13:30403400-30406800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
19 chr13:30403600-30406800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
20 chr13:30404400-30408400 Enhancers Placenta Amnion Placenta Amnion
21 chr13:30404400-30420000 Weak transcription Cortex derived primary cultured neurospheres brain
22 chr13:30404600-30406000 Enhancers Hela-S3 cervix
23 chr13:30404600-30415800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
24 chr13:30404800-30406000 Enhancers Primary T helper cells PMA-I stimulated --
25 chr13:30404800-30406800 Weak transcription Brain Cingulate Gyrus brain
26 chr13:30404800-30407000 Weak transcription Breast Myoepithelial Primary Cells Breast
27 chr13:30404800-30415600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
28 chr13:30404800-30418200 Weak transcription HSMM muscle
29 chr13:30405000-30407200 Weak transcription Pancreatic Islets Pancreatic Islet
30 chr13:30405000-30410600 Weak transcription Osteobl bone
31 chr13:30405200-30406000 Enhancers HMEC breast
32 chr13:30405200-30406800 Weak transcription Liver Liver
33 chr13:30405200-30406800 Weak transcription Stomach Mucosa stomach
34 chr13:30405200-30407000 Weak transcription Duodenum Smooth Muscle Duodenum
35 chr13:30405200-30408800 Weak transcription Primary T killer memory cells from peripheral blood blood
36 chr13:30405200-30409400 Weak transcription Adipose Nuclei Adipose
37 chr13:30405200-30409400 Weak transcription Brain Anterior Caudate brain
38 chr13:30405200-30410000 Weak transcription Primary T helper naive cells from peripheral blood blood
39 chr13:30405200-30415800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
40 chr13:30405400-30406800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
41 chr13:30405400-30410600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
42 chr13:30405400-30419200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
43 chr13:30405600-30406800 Weak transcription Primary T cells fromperipheralblood blood
44 chr13:30405600-30407000 Weak transcription Left Ventricle heart
45 chr13:30405600-30407800 Weak transcription Primary T killer naive cells fromperipheralblood blood
46 chr13:30405600-30414800 Weak transcription iPS-15b Cell Line embryonic stem cell

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Last update: Aug 31, 2015