The 2.0 version of rSNPBase

Variant report

Variant rs1330860
Chromosome Location chr1:94660326-94660327
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:62 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:94634200-94660800 Strong transcription NH-A brain
2 chr1:94634200-94661800 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
3 chr1:94634200-94675200 Weak transcription Rectal Smooth Muscle rectum
4 chr1:94634400-94660400 Strong transcription NHDF-Ad bronchial
5 chr1:94634600-94662000 Strong transcription HMEC breast
6 chr1:94636200-94673400 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
7 chr1:94638400-94669200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
8 chr1:94640000-94684800 Weak transcription Spleen Spleen
9 chr1:94640200-94667800 Weak transcription Gastric stomach
10 chr1:94642400-94684600 Weak transcription Fetal Stomach stomach
11 chr1:94643400-94668800 Weak transcription Stomach Mucosa stomach
12 chr1:94644600-94664400 Weak transcription A549 lung
13 chr1:94644800-94670000 Weak transcription Stomach Smooth Muscle stomach
14 chr1:94644800-94684400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
15 chr1:94645000-94667000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
16 chr1:94645000-94687600 Weak transcription Pancreas Pancrea
17 chr1:94645200-94663600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
18 chr1:94647000-94667800 Weak transcription Aorta Aorta
19 chr1:94647000-94667800 Weak transcription Lung lung
20 chr1:94647200-94662800 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
21 chr1:94647200-94667000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
22 chr1:94647200-94667600 Weak transcription Duodenum Smooth Muscle Duodenum
23 chr1:94647200-94669200 Weak transcription Fetal Adrenal Gland Adrenal Gland
24 chr1:94647200-94675800 Weak transcription Cortex derived primary cultured neurospheres brain
25 chr1:94647400-94669200 Weak transcription Placenta Amnion Placenta Amnion
26 chr1:94647800-94668000 Weak transcription iPS-20b Cell Line embryonic stem cell
27 chr1:94647800-94676200 Weak transcription Small Intestine intestine
28 chr1:94648800-94661000 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
29 chr1:94649400-94684000 Weak transcription Right Ventricle heart
30 chr1:94649600-94680000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
31 chr1:94652200-94667600 Weak transcription HUES64 Cell Line embryonic stem cell
32 chr1:94653400-94661400 Strong transcription NHEK skin
33 chr1:94653600-94668200 Weak transcription Placenta Placenta
34 chr1:94653800-94665000 Weak transcription Psoas Muscle Psoas
35 chr1:94653800-94665200 Weak transcription Fetal Kidney kidney
36 chr1:94654600-94665200 Weak transcription HSMMtube muscle
37 chr1:94654800-94666800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
38 chr1:94655000-94666200 Weak transcription Skeletal Muscle Female skeletal muscle
39 chr1:94655800-94664600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
40 chr1:94656200-94664000 Genic enhancers HUVEC blood vessel
41 chr1:94656600-94664800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
42 chr1:94656600-94665000 Weak transcription Fetal Muscle Leg muscle
43 chr1:94657000-94666600 Weak transcription Fetal Muscle Trunk muscle
44 chr1:94657000-94672000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
45 chr1:94657200-94666000 Weak transcription Skeletal Muscle Male skeletal muscle
46 chr1:94657400-94665200 Weak transcription HepG2 liver
47 chr1:94657600-94663600 Weak transcription Breast Myoepithelial Primary Cells Breast
48 chr1:94658000-94663200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
49 chr1:94658200-94663200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
50 chr1:94658400-94664800 Weak transcription HUES6 Cell Line embryonic stem cell

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Last update: Aug 31, 2015