The 2.0 version of rSNPBase

Variant report

Variant rs1687938
Chromosome Location chr1:94848208-94848209
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:27 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:94834600-94849400 Weak transcription Primary T helper naive cells from peripheral blood blood
2 chr1:94843600-94849200 Enhancers HepG2 liver
3 chr1:94843800-94849200 Enhancers Liver Liver
4 chr1:94846000-94850600 Enhancers Fetal Thymus thymus
5 chr1:94846200-94854400 Enhancers Fetal Intestine Small intestine
6 chr1:94846600-94850200 Enhancers Thymus Thymus
7 chr1:94846600-94851200 Enhancers Primary hematopoietic stem cells blood
8 chr1:94846600-94851400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
9 chr1:94847000-94849000 Enhancers Pancreas Pancrea
10 chr1:94847200-94848400 Enhancers Primary neutrophils fromperipheralblood blood
11 chr1:94847200-94848400 Enhancers Primary hematopoietic stem cells short term culture blood
12 chr1:94847200-94848600 Enhancers Dnd41 blood
13 chr1:94847400-94849200 Enhancers Duodenum Mucosa Duodenum
14 chr1:94847400-94850200 Enhancers Primary T helper cells PMA-I stimulated --
15 chr1:94847400-94850600 Enhancers Stomach Mucosa stomach
16 chr1:94847400-94851800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
17 chr1:94847800-94848800 Weak transcription Fetal Lung lung
18 chr1:94847800-94849200 Enhancers A549 lung
19 chr1:94847800-94849600 Enhancers Fetal Intestine Large intestine
20 chr1:94848000-94849000 Weak transcription Primary T cells from cord blood blood
21 chr1:94848000-94849000 Weak transcription Primary T helper naive cells fromperipheralblood blood
22 chr1:94848000-94849200 Weak transcription Primary T killer naive cells fromperipheralblood blood
23 chr1:94848000-94850200 Weak transcription Sigmoid Colon Sigmoid Colon
24 chr1:94848200-94849200 Weak transcription Rectal Mucosa Donor 29 rectum
25 chr1:94848200-94849200 Weak transcription Rectal Mucosa Donor 31 rectum
26 chr1:94848200-94850200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
27 chr1:94848200-94850200 Weak transcription Spleen Spleen

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Last update: Aug 31, 2015