The 2.0 version of rSNPBase

Variant report

Variant rs7548077
Chromosome Location chr1:94664520-94664521
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:61 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:94634200-94675200 Weak transcription Rectal Smooth Muscle rectum
2 chr1:94636200-94673400 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
3 chr1:94638400-94669200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
4 chr1:94640000-94684800 Weak transcription Spleen Spleen
5 chr1:94640200-94667800 Weak transcription Gastric stomach
6 chr1:94642400-94684600 Weak transcription Fetal Stomach stomach
7 chr1:94643400-94668800 Weak transcription Stomach Mucosa stomach
8 chr1:94644800-94670000 Weak transcription Stomach Smooth Muscle stomach
9 chr1:94644800-94684400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
10 chr1:94645000-94667000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
11 chr1:94645000-94687600 Weak transcription Pancreas Pancrea
12 chr1:94647000-94667800 Weak transcription Aorta Aorta
13 chr1:94647000-94667800 Weak transcription Lung lung
14 chr1:94647200-94667000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
15 chr1:94647200-94667600 Weak transcription Duodenum Smooth Muscle Duodenum
16 chr1:94647200-94669200 Weak transcription Fetal Adrenal Gland Adrenal Gland
17 chr1:94647200-94675800 Weak transcription Cortex derived primary cultured neurospheres brain
18 chr1:94647400-94669200 Weak transcription Placenta Amnion Placenta Amnion
19 chr1:94647800-94668000 Weak transcription iPS-20b Cell Line embryonic stem cell
20 chr1:94647800-94676200 Weak transcription Small Intestine intestine
21 chr1:94649400-94684000 Weak transcription Right Ventricle heart
22 chr1:94649600-94680000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
23 chr1:94652200-94667600 Weak transcription HUES64 Cell Line embryonic stem cell
24 chr1:94653600-94668200 Weak transcription Placenta Placenta
25 chr1:94653800-94665000 Weak transcription Psoas Muscle Psoas
26 chr1:94653800-94665200 Weak transcription Fetal Kidney kidney
27 chr1:94654600-94665200 Weak transcription HSMMtube muscle
28 chr1:94654800-94666800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
29 chr1:94655000-94666200 Weak transcription Skeletal Muscle Female skeletal muscle
30 chr1:94655800-94664600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
31 chr1:94656600-94664800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
32 chr1:94656600-94665000 Weak transcription Fetal Muscle Leg muscle
33 chr1:94657000-94666600 Weak transcription Fetal Muscle Trunk muscle
34 chr1:94657000-94672000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
35 chr1:94657200-94666000 Weak transcription Skeletal Muscle Male skeletal muscle
36 chr1:94657400-94665200 Weak transcription HepG2 liver
37 chr1:94658400-94664800 Weak transcription HUES6 Cell Line embryonic stem cell
38 chr1:94658400-94664800 Weak transcription Adipose Nuclei Adipose
39 chr1:94658400-94665000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
40 chr1:94658400-94665000 Weak transcription Liver Liver
41 chr1:94658400-94665000 Weak transcription NHLF lung
42 chr1:94660400-94681000 Weak transcription Fetal Heart heart
43 chr1:94661200-94664800 Weak transcription HSMM muscle
44 chr1:94662000-94670400 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
45 chr1:94662200-94665200 Genic enhancers NHDF-Ad bronchial
46 chr1:94662600-94665800 Strong transcription Osteobl bone
47 chr1:94662800-94665000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
48 chr1:94663200-94672400 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
49 chr1:94663200-94673000 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
50 chr1:94663200-94674600 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived

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Last update: Aug 31, 2015