The 2.0 version of rSNPBase

Variant report

Variant rs1411697
Chromosome Location chr1:94685475-94685476
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:46 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:94645000-94687600 Weak transcription Pancreas Pancrea
2 chr1:94668400-94687000 Weak transcription HUES64 Cell Line embryonic stem cell
3 chr1:94668800-94699000 Weak transcription iPS-20b Cell Line embryonic stem cell
4 chr1:94669400-94687600 Weak transcription Gastric stomach
5 chr1:94670800-94686400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
6 chr1:94670800-94686400 Weak transcription Placenta Placenta
7 chr1:94673800-94698600 Weak transcription Fetal Muscle Trunk muscle
8 chr1:94673800-94701000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
9 chr1:94674000-94697000 Weak transcription HSMMtube muscle
10 chr1:94676200-94687600 Weak transcription A549 lung
11 chr1:94676400-94691600 Weak transcription Cortex derived primary cultured neurospheres brain
12 chr1:94680800-94688200 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
13 chr1:94681200-94689000 Genic enhancers HUVEC blood vessel
14 chr1:94681800-94685800 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
15 chr1:94682800-94685600 Strong transcription Breast Myoepithelial Primary Cells Breast
16 chr1:94683000-94690000 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
17 chr1:94683800-94686000 Genic enhancers Muscle Satellite Cultured Cells --
18 chr1:94683800-94688000 Strong transcription HMEC breast
19 chr1:94683800-94688400 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
20 chr1:94684000-94686000 Strong transcription NH-A brain
21 chr1:94684200-94690000 Strong transcription NHEK skin
22 chr1:94684400-94688000 Genic enhancers NHDF-Ad bronchial
23 chr1:94684600-94686600 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
24 chr1:94684600-94687400 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
25 chr1:94684800-94685800 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
26 chr1:94684800-94685800 Strong transcription Fetal Muscle Leg muscle
27 chr1:94684800-94692800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
28 chr1:94684800-94698600 Weak transcription Left Ventricle heart
29 chr1:94685000-94686400 Weak transcription Spleen Spleen
30 chr1:94685000-94691400 Weak transcription Fetal Heart heart
31 chr1:94685000-94691800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
32 chr1:94685000-94692000 Weak transcription Skeletal Muscle Female skeletal muscle
33 chr1:94685000-94701000 Weak transcription Right Ventricle heart
34 chr1:94685200-94685600 Weak transcription Liver Liver
35 chr1:94685200-94686000 Strong transcription Osteobl bone
36 chr1:94685200-94686800 Weak transcription Lung lung
37 chr1:94685200-94687800 Weak transcription Fetal Kidney kidney
38 chr1:94685200-94690400 Weak transcription Skeletal Muscle Male skeletal muscle
39 chr1:94685200-94691800 Weak transcription Adipose Nuclei Adipose
40 chr1:94685200-94696800 Weak transcription HepG2 liver
41 chr1:94685200-94700600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
42 chr1:94685200-94700800 Weak transcription NHLF lung
43 chr1:94685200-94701000 Weak transcription Psoas Muscle Psoas
44 chr1:94685400-94689200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
45 chr1:94685400-94690800 Weak transcription HSMM muscle
46 chr1:94685400-94697400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin

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Last update: Aug 31, 2015