Variant report

Variant	rs1451396
Chromosome Location	chr11:83522474-83522475
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 19 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:19)

rs_ID	r²[population]
rs10792694	0.96[CEU][hapmap];0.82[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs10898155	0.83[JPT][hapmap];0.84[EUR][1000 genomes]
rs11607507	0.87[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs12278023	0.80[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs12801433	0.86[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs12803183	0.86[EUR][1000 genomes]
rs1400313	0.80[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1451395	1.00[CEU][hapmap];0.82[CHB][hapmap];0.95[JPT][hapmap];0.89[YRI][hapmap];0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs1914203	0.96[CEU][hapmap];0.87[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs2040309	0.80[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs2040313	0.86[EUR][1000 genomes]
rs3793947	0.86[EUR][1000 genomes]
rs3862777	0.82[CEU][hapmap];0.84[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs5004356	0.84[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs6592141	0.85[EUR][1000 genomes]
rs6592142	0.80[EUR][1000 genomes]
rs7479949	0.83[JPT][hapmap];0.82[AMR][1000 genomes]
rs7924552	0.96[CEU][hapmap];0.93[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs7938923	0.83[AMR][1000 genomes]

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:83517200-83526400	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
2	chr11:83519600-83526600	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
3	chr11:83520000-83524200	Weak transcription	Brain Angular Gyrus	brain
4	chr11:83520000-83525800	Weak transcription	Brain Anterior Caudate	brain
5	chr11:83520600-83523000	Weak transcription	Brain Inferior Temporal Lobe	brain
6	chr11:83520600-83523800	Weak transcription	Brain Hippocampus Middle	brain
7	chr11:83521000-83524200	Weak transcription	Brain Substantia Nigra	brain
8	chr11:83522200-83525200	Enhancers	Brain Cingulate Gyrus	brain

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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