Variant report

Variant	rs7938923
Chromosome Location	chr11:83505436-83505437
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:83505269..83508166-chr11:83508508..83510887,2	K562	blood:

Extended variants
information (count: 31 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:31)

rs_ID	r²[population]
rs10792694	0.83[CEU][hapmap];0.84[JPT][hapmap]
rs10898155	0.92[CEU][hapmap];0.83[CHB][hapmap];0.91[JPT][hapmap];0.85[AMR][1000 genomes];0.85[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs11233743	0.92[CEU][hapmap];0.89[EUR][1000 genomes]
rs11607507	0.93[AMR][1000 genomes];0.89[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs12278023	0.92[CEU][hapmap];0.91[JPT][hapmap];0.86[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs12278928	0.92[CEU][hapmap];0.89[EUR][1000 genomes]
rs12281417	0.90[EUR][1000 genomes]
rs12283611	0.86[EUR][1000 genomes]
rs12284617	0.92[CEU][hapmap];0.83[CHB][hapmap];0.86[JPT][hapmap];0.85[AMR][1000 genomes];0.95[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs12287601	0.86[EUR][1000 genomes]
rs12796763	0.87[EUR][1000 genomes]
rs12801433	0.92[AMR][1000 genomes];0.89[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs12801474	0.82[AMR][1000 genomes];0.82[ASN][1000 genomes]
rs1400313	0.88[CEU][hapmap];0.95[CHB][hapmap];0.95[JPT][hapmap];0.80[AMR][1000 genomes]
rs1451394	0.88[CEU][hapmap];0.91[CHB][hapmap];0.95[JPT][hapmap];0.81[AMR][1000 genomes];0.82[ASN][1000 genomes]
rs1451395	0.83[AMR][1000 genomes]
rs1451396	0.83[AMR][1000 genomes]
rs1914203	0.83[CHB][hapmap];0.86[JPT][hapmap]
rs3862777	0.92[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];0.97[AMR][1000 genomes];0.91[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs4143313	0.89[EUR][1000 genomes]
rs4143314	0.84[CEU][hapmap];0.89[EUR][1000 genomes]
rs4143315	0.89[EUR][1000 genomes]
rs5004356	0.97[AMR][1000 genomes];0.91[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs6592140	0.96[CEU][hapmap];0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6592141	0.96[CEU][hapmap];0.82[CHB][hapmap];0.95[JPT][hapmap];0.83[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs6592142	0.84[CEU][hapmap];0.95[JPT][hapmap];0.84[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs715859	0.86[EUR][1000 genomes]
rs7479949	0.96[CEU][hapmap];0.91[CHB][hapmap];0.91[JPT][hapmap];0.96[YRI][hapmap];0.96[AFR][1000 genomes];0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7924552	0.83[CHB][hapmap];0.86[JPT][hapmap];0.85[AMR][1000 genomes]
rs7952434	1.00[CEU][hapmap];0.96[CHB][hapmap];1.00[JPT][hapmap];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs896313	0.84[CEU][hapmap];0.90[EUR][1000 genomes]

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:83498200-83506600	Weak transcription	Brain Hippocampus Middle	brain

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