Variant report

Variant	rs5004356
Chromosome Location	chr11:83507609-83507610
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:83505269..83508166-chr11:83508508..83510887,2	K562	blood:

Extended variants
information (count: 30 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:30)

rs_ID	r²[population]
rs10898155	0.86[AMR][1000 genomes];0.94[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs11233743	0.81[EUR][1000 genomes]
rs11607507	0.94[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12278023	0.89[AMR][1000 genomes];0.95[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs12278928	0.81[EUR][1000 genomes]
rs12281417	0.82[EUR][1000 genomes]
rs12284617	0.84[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs12801433	0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs12801474	0.83[AMR][1000 genomes];0.83[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs12803183	0.83[EUR][1000 genomes]
rs1400313	0.81[AMR][1000 genomes];0.86[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs1451394	0.82[AMR][1000 genomes];0.83[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs1451395	0.84[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs1451396	0.84[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs1914203	0.80[AMR][1000 genomes];0.83[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2040309	0.83[EUR][1000 genomes]
rs2040313	0.80[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs3793947	0.81[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs3862777	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4143313	0.81[EUR][1000 genomes]
rs4143314	0.81[EUR][1000 genomes]
rs4143315	0.81[EUR][1000 genomes]
rs6592140	0.90[AMR][1000 genomes];0.89[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs6592141	0.86[AMR][1000 genomes];0.97[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs6592142	0.87[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs7479949	0.96[AMR][1000 genomes];0.89[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs7924552	0.88[AMR][1000 genomes];0.83[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs7938923	0.97[AMR][1000 genomes];0.91[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs7952434	0.90[AMR][1000 genomes];0.91[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs896313	0.82[EUR][1000 genomes]

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:83506600-83508400	Enhancers	Brain Hippocampus Middle	brain
2	chr11:83507000-83508200	Enhancers	Brain Substantia Nigra	brain
3	chr11:83507000-83508600	Enhancers	Brain Cingulate Gyrus	brain
4	chr11:83507400-83508200	Enhancers	Brain Angular Gyrus	brain
5	chr11:83507400-83508400	Enhancers	Brain Inferior Temporal Lobe	brain
6	chr11:83507400-83511000	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin

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