Variant report

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs10792694	0.89[AMR][1000 genomes];0.92[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs10898155	0.84[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs11607507	0.82[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs12278023	0.85[EUR][1000 genomes]
rs12801433	0.81[AMR][1000 genomes];0.87[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs12801474	0.81[AMR][1000 genomes];0.84[ASN][1000 genomes]
rs12803183	0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs1400313	0.87[AMR][1000 genomes];0.91[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs1451394	0.80[AMR][1000 genomes];0.83[ASN][1000 genomes]
rs1451395	0.86[EUR][1000 genomes]
rs1451396	0.86[EUR][1000 genomes]
rs1914203	0.86[AMR][1000 genomes];0.86[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs2040309	0.89[AMR][1000 genomes];0.96[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2040313	0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs3862777	0.81[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs5004356	0.81[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs6592140	0.82[AMR][1000 genomes]
rs6592141	0.82[AMR][1000 genomes];0.87[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs6592142	0.83[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs7924552	0.82[AMR][1000 genomes];0.86[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs7952434	0.84[AMR][1000 genomes]

Variant related diseases (count:1)

Disease	PMID	Source
Parkinson's disease	25064009	GWAS catalog

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:83535000-83546600	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
2	chr11:83538800-83546200	Weak transcription	Rectal Smooth Muscle	rectum
3	chr11:83539600-83545400	Weak transcription	Brain Hippocampus Middle	brain
4	chr11:83539600-83545400	Weak transcription	Brain Substantia Nigra	brain
5	chr11:83539800-83545400	Weak transcription	Brain Anterior Caudate	brain
6	chr11:83539800-83545400	Weak transcription	Brain Cingulate Gyrus	brain
7	chr11:83539800-83545600	Weak transcription	Brain Inferior Temporal Lobe	brain
8	chr11:83540000-83545400	Weak transcription	Brain Angular Gyrus	brain
9	chr11:83543600-83545800	Weak transcription	Stomach Mucosa	stomach
10	chr11:83543600-83546200	Weak transcription	HepG2	liver
11	chr11:83544000-83546000	Weak transcription	Liver	Liver
12	chr11:83544200-83548000	Weak transcription	Aorta	Aorta

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