Variant report

Variant	rs10898155
Chromosome Location	chr11:83512154-83512155
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 32 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:32)

rs_ID	r²[population]
rs10792694	0.82[CEU][hapmap];0.85[CHB][hapmap];0.94[JPT][hapmap];0.80[AMR][1000 genomes];0.82[ASN][1000 genomes]
rs11233743	0.89[CEU][hapmap];0.80[EUR][1000 genomes]
rs11607507	0.89[AMR][1000 genomes];0.96[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs12278023	1.00[CEU][hapmap];0.84[GIH][hapmap];0.91[JPT][hapmap];1.00[MEX][hapmap];0.91[TSI][hapmap];0.90[AMR][1000 genomes];0.97[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs12278928	0.89[CEU][hapmap];0.91[TSI][hapmap]
rs12281417	0.81[EUR][1000 genomes]
rs12284617	0.96[CEU][hapmap];0.88[CHD][hapmap];0.89[GIH][hapmap];0.95[JPT][hapmap];0.96[MEX][hapmap];0.91[TSI][hapmap];0.89[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs12287601	0.81[CEU][hapmap];0.89[TSI][hapmap]
rs12801433	0.88[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12801474	0.90[AMR][1000 genomes];0.84[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs12803183	0.82[AMR][1000 genomes];0.83[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs1400313	0.88[CEU][hapmap];0.87[CHB][hapmap];0.89[CHD][hapmap];0.86[JPT][hapmap];1.00[MEX][hapmap];0.93[TSI][hapmap];0.86[YRI][hapmap];0.90[AMR][1000 genomes];0.90[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs1451394	0.89[ASW][hapmap];0.88[CEU][hapmap];0.91[CHB][hapmap];0.89[CHD][hapmap];0.95[JPT][hapmap];0.91[LWK][hapmap];1.00[MEX][hapmap];0.93[YRI][hapmap];0.89[AFR][1000 genomes];0.89[AMR][1000 genomes];0.84[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs1451395	0.84[EUR][1000 genomes]
rs1451396	0.83[JPT][hapmap];0.84[EUR][1000 genomes]
rs1914203	0.91[CHB][hapmap];0.86[CHD][hapmap];0.89[GIH][hapmap];0.95[JPT][hapmap];0.96[MEX][hapmap];0.82[TSI][hapmap];0.83[YRI][hapmap];0.85[AMR][1000 genomes];0.83[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2040309	0.82[AMR][1000 genomes];0.83[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2040313	0.83[AMR][1000 genomes];0.83[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs3793947	0.84[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs3862777	0.92[CEU][hapmap];0.83[CHB][hapmap];0.84[CHD][hapmap];0.89[GIH][hapmap];0.95[JPT][hapmap];0.96[MEX][hapmap];0.93[TSI][hapmap];0.86[AMR][1000 genomes];0.94[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs4143313	0.80[EUR][1000 genomes]
rs4143314	0.89[CEU][hapmap];0.93[TSI][hapmap];0.80[EUR][1000 genomes]
rs4143315	0.80[EUR][1000 genomes]
rs5004356	0.86[AMR][1000 genomes];0.94[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs6592140	0.96[CEU][hapmap];0.89[AMR][1000 genomes];0.83[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs6592141	0.96[CEU][hapmap];0.82[CHB][hapmap];0.89[CHD][hapmap];0.89[GIH][hapmap];0.86[JPT][hapmap];1.00[MEX][hapmap];0.93[TSI][hapmap];0.91[AMR][1000 genomes];0.95[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs6592142	0.92[CEU][hapmap];0.82[GIH][hapmap];0.86[JPT][hapmap];0.96[MEX][hapmap];0.93[TSI][hapmap];0.99[AMR][1000 genomes];0.94[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs7479949	0.96[CEU][hapmap];0.82[CHB][hapmap];0.88[CHD][hapmap];0.87[GIH][hapmap];1.00[JPT][hapmap];0.96[MEX][hapmap];0.86[TSI][hapmap];0.84[AMR][1000 genomes];0.83[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs7924552	0.91[CHB][hapmap];0.88[CHD][hapmap];0.95[JPT][hapmap];0.96[MEX][hapmap];0.83[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7938923	0.92[CEU][hapmap];0.83[CHB][hapmap];0.91[JPT][hapmap];0.85[AMR][1000 genomes];0.85[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs7952434	0.92[CEU][hapmap];0.91[JPT][hapmap];0.89[YRI][hapmap];0.91[AMR][1000 genomes];0.85[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs896313	0.89[CEU][hapmap];0.93[TSI][hapmap];0.81[EUR][1000 genomes]

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:83508200-83514400	Weak transcription	Brain Angular Gyrus	brain
2	chr11:83508200-83514400	Weak transcription	Brain Substantia Nigra	brain
3	chr11:83508400-83514200	Weak transcription	Brain Inferior Temporal Lobe	brain
4	chr11:83510800-83514800	Weak transcription	Brain Hippocampus Middle	brain
5	chr11:83511400-83514200	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
6	chr11:83512000-83512400	Enhancers	Brain Cingulate Gyrus	brain

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