Variant report

Variant	rs12278928
Chromosome Location	chr11:83496979-83496980
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 23 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs10898155	0.89[CEU][hapmap];0.91[TSI][hapmap]
rs11233743	1.00[CEU][hapmap];0.88[CHB][hapmap];0.88[JPT][hapmap];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12278023	0.89[CEU][hapmap];0.84[GIH][hapmap];0.87[TSI][hapmap];0.82[EUR][1000 genomes]
rs12281417	0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12283611	0.81[AMR][1000 genomes];0.91[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs12284617	0.92[CEU][hapmap];0.87[GIH][hapmap];0.95[TSI][hapmap];0.94[EUR][1000 genomes]
rs12287601	0.85[CEU][hapmap];0.89[CHB][hapmap];0.91[CHD][hapmap];0.98[GIH][hapmap];1.00[JPT][hapmap];0.95[MEX][hapmap];0.89[TSI][hapmap];0.86[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12796763	0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1400313	0.85[CEU][hapmap];0.89[TSI][hapmap]
rs1914203	0.87[TSI][hapmap]
rs3862777	0.87[ASW][hapmap];0.81[CEU][hapmap];0.82[GIH][hapmap];0.93[TSI][hapmap];0.81[EUR][1000 genomes]
rs4143313	0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4143314	0.80[ASW][hapmap];0.92[CEU][hapmap];0.89[CHB][hapmap];0.97[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.95[LWK][hapmap];1.00[MEX][hapmap];0.93[MKK][hapmap];0.93[TSI][hapmap];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4143315	0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs5004356	0.81[EUR][1000 genomes]
rs6592140	0.85[CEU][hapmap];0.88[EUR][1000 genomes]
rs6592141	0.85[CEU][hapmap];0.82[GIH][hapmap];0.89[TSI][hapmap]
rs6592142	0.81[CEU][hapmap];0.84[TSI][hapmap]
rs715859	0.83[AMR][1000 genomes];0.93[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7479949	0.87[ASW][hapmap];0.85[CEU][hapmap];0.85[GIH][hapmap];0.95[TSI][hapmap];0.88[EUR][1000 genomes]
rs7938923	0.92[CEU][hapmap];0.89[EUR][1000 genomes]
rs7952434	0.88[CEU][hapmap];0.89[EUR][1000 genomes]
rs896313	0.92[CEU][hapmap];0.94[CHB][hapmap];0.97[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.95[LWK][hapmap];1.00[MEX][hapmap];0.93[MKK][hapmap];0.93[TSI][hapmap];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:83493800-83498000	Weak transcription	Brain Hippocampus Middle	brain
2	chr11:83495400-83503200	Weak transcription	Liver	Liver

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