Variant report

Variant	rs11233743
Chromosome Location	chr11:83493425-83493426
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:82997142..82998866-chr11:83492374..83495338,2	MCF-7	breast:
2	chr11:83489470..83491654-chr11:83491935..83494460,2	K562	blood:

Variant related genes	Relation type
ENSG00000137500	Chromatin interaction
ENSG00000255234	Chromatin interaction

Extended variants
information (count: 22 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs10898155	0.89[CEU][hapmap];0.80[EUR][1000 genomes]
rs12278023	0.89[CEU][hapmap];0.82[EUR][1000 genomes]
rs12278928	1.00[CEU][hapmap];0.88[CHB][hapmap];0.88[JPT][hapmap];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12281417	0.98[AFR][1000 genomes];0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12283611	0.83[AMR][1000 genomes];0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12284617	0.92[CEU][hapmap];0.94[EUR][1000 genomes]
rs12287601	0.85[CEU][hapmap];1.00[CHB][hapmap];0.88[JPT][hapmap];0.87[AMR][1000 genomes];0.94[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12796763	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1400313	0.85[CEU][hapmap]
rs3862777	0.81[CEU][hapmap];0.81[EUR][1000 genomes]
rs4143313	0.99[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4143314	0.92[CEU][hapmap];1.00[CHB][hapmap];0.88[JPT][hapmap];1.00[YRI][hapmap];0.99[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4143315	0.99[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs5004356	0.81[EUR][1000 genomes]
rs6592140	0.85[CEU][hapmap];0.89[EUR][1000 genomes]
rs6592141	0.85[CEU][hapmap]
rs6592142	0.81[CEU][hapmap]
rs715859	0.84[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7479949	0.85[CEU][hapmap];0.89[EUR][1000 genomes]
rs7938923	0.92[CEU][hapmap];0.89[EUR][1000 genomes]
rs7952434	0.89[CEU][hapmap];0.89[EUR][1000 genomes]
rs896313	0.92[CEU][hapmap];0.94[CHB][hapmap];0.88[JPT][hapmap];1.00[YRI][hapmap];0.99[AFR][1000 genomes];0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:83492400-83495600	Weak transcription	Brain Substantia Nigra	brain
2	chr11:83493400-83493800	Enhancers	Brain Hippocampus Middle	brain

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