Variant report

Variant	rs12284617
Chromosome Location	chr11:83500105-83500106
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 31 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:31)

rs_ID	r²[population]
rs10792694	0.88[JPT][hapmap]
rs10898155	0.96[CEU][hapmap];0.88[CHD][hapmap];0.89[GIH][hapmap];0.95[JPT][hapmap];0.96[MEX][hapmap];0.91[TSI][hapmap];0.89[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs11233743	0.92[CEU][hapmap];0.94[EUR][1000 genomes]
rs11607507	0.81[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs12278023	0.96[CEU][hapmap];0.84[GIH][hapmap];0.86[JPT][hapmap];0.96[MEX][hapmap];0.91[TSI][hapmap];0.82[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs12278928	0.92[CEU][hapmap];0.87[GIH][hapmap];0.95[TSI][hapmap];0.94[EUR][1000 genomes]
rs12281417	0.94[EUR][1000 genomes]
rs12283611	0.87[EUR][1000 genomes]
rs12287601	0.84[CEU][hapmap];0.85[GIH][hapmap];0.93[TSI][hapmap];0.90[EUR][1000 genomes]
rs12796763	0.92[EUR][1000 genomes]
rs12801433	0.85[EUR][1000 genomes]
rs12801474	0.82[AMR][1000 genomes]
rs1400313	0.85[CEU][hapmap];0.82[JPT][hapmap];0.96[MEX][hapmap];0.89[TSI][hapmap];0.82[AMR][1000 genomes]
rs1451394	0.85[CEU][hapmap];0.91[JPT][hapmap];0.96[MEX][hapmap];0.81[AMR][1000 genomes]
rs1914203	0.82[CHB][hapmap];0.87[GIH][hapmap];0.91[JPT][hapmap];0.91[MEX][hapmap];0.86[TSI][hapmap]
rs3862777	0.88[CEU][hapmap];0.83[CHB][hapmap];0.86[CHD][hapmap];0.87[GIH][hapmap];0.91[JPT][hapmap];1.00[MEX][hapmap];0.93[TSI][hapmap];0.84[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs4143313	0.93[EUR][1000 genomes]
rs4143314	0.92[CEU][hapmap];0.87[GIH][hapmap];0.98[TSI][hapmap];0.93[EUR][1000 genomes]
rs4143315	0.93[EUR][1000 genomes]
rs5004356	0.84[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs56836954	0.88[AFR][1000 genomes]
rs6592140	0.92[CEU][hapmap];0.93[AMR][1000 genomes];0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs6592141	0.92[CEU][hapmap];0.87[GIH][hapmap];0.82[JPT][hapmap];0.96[MEX][hapmap];0.86[MKK][hapmap];0.93[TSI][hapmap];0.83[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs6592142	0.88[CEU][hapmap];0.80[GIH][hapmap];0.81[JPT][hapmap];0.92[MEX][hapmap];0.89[TSI][hapmap];0.90[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs68127610	0.84[AFR][1000 genomes]
rs715859	0.89[EUR][1000 genomes]
rs7479949	0.92[CEU][hapmap];0.91[CHB][hapmap];0.95[CHD][hapmap];0.93[GIH][hapmap];0.95[JPT][hapmap];1.00[MEX][hapmap];0.95[TSI][hapmap];0.86[AMR][1000 genomes];0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7924552	0.82[CHB][hapmap];0.84[CHD][hapmap];0.91[JPT][hapmap];0.91[MEX][hapmap]
rs7938923	0.92[CEU][hapmap];0.83[CHB][hapmap];0.86[JPT][hapmap];0.85[AMR][1000 genomes];0.95[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7952434	0.88[CEU][hapmap];0.87[CHB][hapmap];0.86[JPT][hapmap];0.91[AMR][1000 genomes];0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs896313	0.92[CEU][hapmap];0.87[GIH][hapmap];0.98[TSI][hapmap];0.94[EUR][1000 genomes]

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:83495400-83503200	Weak transcription	Liver	Liver
2	chr11:83498200-83506600	Weak transcription	Brain Hippocampus Middle	brain

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