Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:118607956..118610219-chr10:118618457..118621328,3	MCF-7	breast:

Variant related genes	Relation type
ENSG00000188316	Chromatin interaction
ENSG00000225302	Chromatin interaction

rSNPs within LD-proxies of this variant (count:32)

rs_ID	r²[population]
rs1023549	0.82[CHB][hapmap]
rs1023551	0.86[CHB][hapmap]
rs10510025	0.95[JPT][hapmap]
rs10886016	0.95[JPT][hapmap]
rs10886021	0.85[JPT][hapmap]
rs11197834	0.84[CEU][hapmap];0.85[EUR][1000 genomes]
rs11197863	0.95[JPT][hapmap]
rs1122688	0.89[JPT][hapmap]
rs12769006	0.85[JPT][hapmap]
rs1419832	0.89[JPT][hapmap]
rs1637571	0.82[AMR][1000 genomes];0.84[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1637572	1.00[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.88[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1905538	0.95[JPT][hapmap]
rs1905544	0.95[JPT][hapmap]
rs2101264	0.95[JPT][hapmap]
rs2118207	0.89[JPT][hapmap]
rs2170862	1.00[CEU][hapmap];0.84[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs2531685	0.85[JPT][hapmap]
rs2531686	0.85[JPT][hapmap]
rs2531689	0.93[JPT][hapmap]
rs2627194	0.90[JPT][hapmap];0.84[YRI][hapmap]
rs2627197	0.83[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.95[AMR][1000 genomes];0.95[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4752015	0.99[EUR][1000 genomes]
rs7083543	0.95[EUR][1000 genomes]
rs7087685	0.83[CEU][hapmap];0.95[EUR][1000 genomes]
rs740600	0.95[JPT][hapmap]
rs7896612	0.96[EUR][1000 genomes]
rs7903295	0.95[JPT][hapmap]
rs9420215	1.00[CEU][hapmap];0.84[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs9421248	0.94[EUR][1000 genomes]
rs9421249	0.93[EUR][1000 genomes]
rs9421250	0.84[CEU][hapmap];0.92[EUR][1000 genomes]

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs1637570	KIAA1598	cis	Whole Blood	GTEx

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:118617800-118626800	Weak transcription	Breast Myoepithelial Primary Cells	Breast

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