Variant report
Variant | rs16844967 |
---|---|
Chromosome Location | chr1:172726565-172726566 |
allele | A/G |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:8)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
(count:8 , 50 per page) page:
1
No. | Distal block | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr1:172723346..172726622-chr1:172728222..172731165,3 | MCF-7 | breast: | |
2 | chr1:172725233..172726811-chr1:172732167..172734221,2 | K562 | blood: | |
3 | chr1:172726299..172728940-chr1:172732023..172734758,2 | MCF-7 | breast: | |
4 | chr1:172719731..172722096-chr1:172724351..172726737,2 | MCF-7 | breast: | |
5 | chr1:172704566..172706216-chr1:172724712..172727037,2 | K562 | blood: | |
6 | chr1:172710406..172712231-chr1:172726192..172728085,2 | MCF-7 | breast: | |
7 | chr1:172724823..172727270-chr1:172740302..172742079,2 | MCF-7 | breast: | |
8 | chr1:172723025..172725126-chr1:172725246..172727256,2 | MCF-7 | breast: |
No data |
No data |
No data |
No data |
rs_ID | r2[population] |
---|---|
rs11803350 | 0.85[AMR][1000 genomes] |
rs1492902 | 0.85[AMR][1000 genomes] |
rs1492903 | 0.85[AMR][1000 genomes] |
rs16844927 | 0.85[AMR][1000 genomes] |
rs16844937 | 0.85[AMR][1000 genomes] |
rs16844939 | 0.85[AMR][1000 genomes] |
rs16844968 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs41421246 | 0.96[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs55913261 | 0.85[AMR][1000 genomes] |
rs56663247 | 0.85[AMR][1000 genomes] |
rs57707973 | 0.85[AMR][1000 genomes] |
rs59424718 | 0.85[AFR][1000 genomes] |
rs61223740 | 0.85[AMR][1000 genomes] |
rs61383871 | 0.85[AMR][1000 genomes] |
rs61489888 | 0.88[AFR][1000 genomes] |
rs6425039 | 0.85[AMR][1000 genomes] |
rs6425040 | 0.85[AMR][1000 genomes] |
rs6425097 | 0.88[AFR][1000 genomes] |
rs6664516 | 0.85[AMR][1000 genomes] |
rs6691607 | 0.85[AMR][1000 genomes] |
rs73038034 | 0.85[AMR][1000 genomes] |
rs73038039 | 0.85[AMR][1000 genomes] |
rs73038049 | 0.85[AMR][1000 genomes] |
rs73038063 | 0.85[AMR][1000 genomes] |
rs73038078 | 0.85[AMR][1000 genomes] |
rs73038085 | 0.85[AMR][1000 genomes] |
rs73038088 | 0.85[AMR][1000 genomes] |
rs73038099 | 0.96[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs7519689 | 0.85[AMR][1000 genomes] |
rs7527983 | 0.85[AMR][1000 genomes] |
rs7532033 | 0.85[AMR][1000 genomes] |
rs7537304 | 0.85[AMR][1000 genomes] |
rs7542816 | 0.85[AMR][1000 genomes] |
rs7553473 | 0.85[AMR][1000 genomes] |
rs987261 | 0.85[AMR][1000 genomes] |
rs989340 | 0.85[AMR][1000 genomes] |
No data |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr1:172716400-172729400 | Weak transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |