Variant report

Variant	rs73038088
Chromosome Location	chr1:172699224-172699225
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 37 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:37)

rs_ID	r²[population]
rs11803323	0.85[AMR][1000 genomes]
rs11803350	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs1492902	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs1492903	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs16844922	0.85[AMR][1000 genomes]
rs16844927	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs16844937	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs16844939	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs16844967	0.85[AMR][1000 genomes]
rs16844968	0.85[AMR][1000 genomes]
rs41421246	0.85[AMR][1000 genomes]
rs55913261	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs56663247	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs57707973	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs59977644	0.85[AMR][1000 genomes]
rs61223740	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs61383871	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6425039	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6425040	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6425042	0.85[AMR][1000 genomes]
rs6664516	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6691607	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73038034	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73038039	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73038049	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73038063	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73038078	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73038085	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73038099	0.85[AMR][1000 genomes]
rs7519689	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7527983	1.00[AMR][1000 genomes]
rs7532033	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7537304	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7542816	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7553473	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs987261	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs989340	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:172689200-172700400	Weak transcription	Primary T killer memory cells from peripheral blood	blood
2	chr1:172693400-172712200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
3	chr1:172696800-172702600	Weak transcription	Monocytes-CD14+_RO01746	blood

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