The 2.0 version of rSNPBase

Variant report

Variant rs7527983
Chromosome Location chr1:172688092-172688093
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:43 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:172683400-172689200 Weak transcription H1 Cell Line embryonic stem cell
2 chr1:172684000-172688400 Weak transcription HUES48 Cell Line embryonic stem cell
3 chr1:172684000-172689000 Weak transcription iPS-15b Cell Line embryonic stem cell
4 chr1:172684000-172692400 Weak transcription HUES64 Cell Line embryonic stem cell
5 chr1:172685000-172690400 Enhancers Placenta Placenta
6 chr1:172685400-172689200 Enhancers Primary Natural Killer cells fromperipheralblood blood
7 chr1:172685800-172689000 Weak transcription Primary T killer naive cells fromperipheralblood blood
8 chr1:172685800-172689000 Weak transcription Left Ventricle heart
9 chr1:172686000-172688400 Enhancers Fetal Intestine Large intestine
10 chr1:172686000-172688600 Weak transcription Primary T regulatory cells fromperipheralblood blood
11 chr1:172686000-172688600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
12 chr1:172686000-172688600 Weak transcription Primary T killer memory cells from peripheral blood blood
13 chr1:172686000-172693600 Weak transcription Primary T helper cells fromperipheralblood blood
14 chr1:172686200-172688400 Weak transcription Dnd41 blood
15 chr1:172686200-172693800 Weak transcription Primary T cells fromperipheralblood blood
16 chr1:172686200-172693800 Weak transcription Primary T helper naive cells fromperipheralblood blood
17 chr1:172686200-172693800 Weak transcription Fetal Thymus thymus
18 chr1:172686400-172688400 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
19 chr1:172686600-172688400 Enhancers Osteobl bone
20 chr1:172686800-172688600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
21 chr1:172686800-172688600 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
22 chr1:172686800-172689200 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
23 chr1:172686800-172689200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
24 chr1:172687000-172688400 Enhancers HMEC breast
25 chr1:172687000-172688800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
26 chr1:172687000-172689400 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
27 chr1:172687000-172689600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
28 chr1:172687000-172689800 Enhancers Placenta Amnion Placenta Amnion
29 chr1:172687200-172688200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
30 chr1:172687200-172689200 Enhancers NHLF lung
31 chr1:172687400-172689000 Weak transcription A549 lung
32 chr1:172687600-172688600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
33 chr1:172687600-172689200 Enhancers Primary T helper memory cells from peripheral blood 2 blood
34 chr1:172687600-172689200 Flanking Active TSS NHEK skin
35 chr1:172687600-172689800 Enhancers Breast Myoepithelial Primary Cells Breast
36 chr1:172687800-172688400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
37 chr1:172687800-172688600 Weak transcription Primary T helper naive cells from peripheral blood blood
38 chr1:172687800-172688600 Enhancers NHDF-Ad bronchial
39 chr1:172687800-172689400 Enhancers Primary T helper cells PMA-I stimulated --
40 chr1:172687800-172692400 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
41 chr1:172688000-172688400 Enhancers Stomach Smooth Muscle stomach
42 chr1:172688000-172688600 Flanking Active TSS K562 blood
43 chr1:172688000-172690000 Enhancers ES-I3 Cell Line embryonic stem cell

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Last update: Aug 31, 2015