The 2.0 version of rSNPBase

Variant report

Variant rs41421246
Chromosome Location chr1:172716579-172716580
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:35 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:172712000-172717000 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
2 chr1:172714000-172716600 Enhancers Primary B cells from peripheral blood blood
3 chr1:172714000-172716600 Enhancers Primary T helper 17 cells PMA-I stimulated --
4 chr1:172714000-172716600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
5 chr1:172714000-172716600 Enhancers Duodenum Mucosa Duodenum
6 chr1:172714000-172716600 Enhancers HSMM muscle
7 chr1:172714000-172716800 Enhancers Primary T helper memory cells from peripheral blood 1 blood
8 chr1:172714000-172717000 Enhancers Primary monocytes fromperipheralblood blood
9 chr1:172714000-172717000 Enhancers Primary Natural Killer cells fromperipheralblood blood
10 chr1:172714000-172717800 Enhancers Primary T cells fromperipheralblood blood
11 chr1:172714200-172716600 Enhancers Primary T regulatory cells fromperipheralblood blood
12 chr1:172714200-172716600 Enhancers Primary T killer memory cells from peripheral blood blood
13 chr1:172714200-172716800 Enhancers Primary B cells from cord blood blood
14 chr1:172714400-172716600 Enhancers Primary hematopoietic stem cells blood
15 chr1:172714400-172716600 Enhancers Primary hematopoietic stem cells short term culture blood
16 chr1:172714400-172716600 Enhancers Fetal Thymus thymus
17 chr1:172714400-172716600 Enhancers Small Intestine intestine
18 chr1:172714400-172716600 Flanking Active TSS Monocytes-CD14+_RO01746 blood
19 chr1:172715000-172716600 Enhancers Primary neutrophils fromperipheralblood blood
20 chr1:172715400-172716600 Enhancers Dnd41 blood
21 chr1:172715600-172716600 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
22 chr1:172715600-172716600 Enhancers HUVEC blood vessel
23 chr1:172715800-172716800 Enhancers Primary T cells from cord blood blood
24 chr1:172715800-172716800 Enhancers Primary T helper memory cells from peripheral blood 2 blood
25 chr1:172715800-172716800 Enhancers Primary T killer naive cells fromperipheralblood blood
26 chr1:172715800-172717000 Enhancers Primary T helper naive cells fromperipheralblood blood
27 chr1:172715800-172717000 Enhancers Primary T helper cells PMA-I stimulated --
28 chr1:172715800-172717000 Enhancers Primary T helper cells fromperipheralblood blood
29 chr1:172715800-172717200 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
30 chr1:172716000-172716600 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
31 chr1:172716000-172716600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
32 chr1:172716200-172716600 Enhancers Muscle Satellite Cultured Cells --
33 chr1:172716200-172717000 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
34 chr1:172716200-172717000 Enhancers Primary T helper naive cells from peripheral blood blood
35 chr1:172716400-172729400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin

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Last update: Aug 31, 2015