The 2.0 version of rSNPBase

Variant report

Variant rs17271223
Chromosome Location chr11:9930604-9930605
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:54 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:9878800-9952200 Weak transcription Aorta Aorta
2 chr11:9894400-9978600 Weak transcription Left Ventricle heart
3 chr11:9904000-9937000 Weak transcription Sigmoid Colon Sigmoid Colon
4 chr11:9910000-9954600 Weak transcription Pancreas Pancrea
5 chr11:9915000-9937200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
6 chr11:9916600-9932600 Weak transcription Fetal Intestine Small intestine
7 chr11:9916800-9944400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
8 chr11:9916800-9944400 Weak transcription Primary hematopoietic stem cells short term culture blood
9 chr11:9917000-9937200 Weak transcription Fetal Muscle Trunk muscle
10 chr11:9917600-9933200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
11 chr11:9917600-9934200 Weak transcription Skeletal Muscle Female skeletal muscle
12 chr11:9917600-9951800 Weak transcription Stomach Smooth Muscle stomach
13 chr11:9917600-9952400 Weak transcription Primary monocytes fromperipheralblood blood
14 chr11:9917800-9933200 Weak transcription Primary hematopoietic stem cells blood
15 chr11:9917800-9952600 Weak transcription Duodenum Smooth Muscle Duodenum
16 chr11:9920000-9933200 Weak transcription Fetal Stomach stomach
17 chr11:9921400-9934400 Weak transcription Monocytes-CD14+_RO01746 blood
18 chr11:9923400-9943600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
19 chr11:9923400-9952200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
20 chr11:9924000-9944400 Weak transcription H9 Cell Line embryonic stem cell
21 chr11:9925200-9944400 Weak transcription Ovary ovary
22 chr11:9925400-9951000 Weak transcription Fetal Adrenal Gland Adrenal Gland
23 chr11:9925400-9952200 Weak transcription Lung lung
24 chr11:9927800-9944400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
25 chr11:9928000-9944200 Weak transcription Cortex derived primary cultured neurospheres brain
26 chr11:9928000-9944400 Weak transcription Brain Anterior Caudate brain
27 chr11:9928400-9944200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
28 chr11:9928600-9938200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
29 chr11:9928600-9944200 Weak transcription Adipose Nuclei Adipose
30 chr11:9928800-9931000 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
31 chr11:9929000-9935600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
32 chr11:9929000-9944200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
33 chr11:9929000-9944400 Weak transcription Liver Liver
34 chr11:9929000-9952000 Weak transcription Fetal Lung lung
35 chr11:9929200-9941000 Weak transcription Placenta Amnion Placenta Amnion
36 chr11:9929200-9966800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
37 chr11:9929400-9933200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
38 chr11:9929400-9934000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
39 chr11:9929400-9936000 Weak transcription NHEK skin
40 chr11:9929400-9944400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
41 chr11:9929600-9935400 Weak transcription NHLF lung
42 chr11:9929600-9936200 Weak transcription NH-A brain
43 chr11:9929600-9944200 Weak transcription Breast Myoepithelial Primary Cells Breast
44 chr11:9929600-9944400 Weak transcription Muscle Satellite Cultured Cells --
45 chr11:9929600-9944400 Weak transcription HSMM muscle
46 chr11:9929600-9944400 Weak transcription Osteobl bone
47 chr11:9929600-9953000 Weak transcription HSMMtube muscle
48 chr11:9929800-9931600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
49 chr11:9929800-9931600 Weak transcription A549 lung
50 chr11:9929800-9931600 Weak transcription NHDF-Ad bronchial

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Last update: Aug 31, 2015