The 2.0 version of rSNPBase

Variant report

Variant rs55811615
Chromosome Location chr11:9918880-9918881
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:77 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:9878800-9952200 Weak transcription Aorta Aorta
2 chr11:9882400-9929600 Weak transcription Primary T cells from cord blood blood
3 chr11:9892400-9921200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
4 chr11:9894400-9978600 Weak transcription Left Ventricle heart
5 chr11:9904000-9937000 Weak transcription Sigmoid Colon Sigmoid Colon
6 chr11:9906800-9920400 Weak transcription HUVEC blood vessel
7 chr11:9910000-9954600 Weak transcription Pancreas Pancrea
8 chr11:9910200-9921000 Weak transcription Placenta Amnion Placenta Amnion
9 chr11:9911600-9919200 Weak transcription Fetal Brain Female brain
10 chr11:9911800-9921200 Weak transcription HMEC breast
11 chr11:9913400-9919800 Weak transcription Rectal Smooth Muscle rectum
12 chr11:9913400-9921000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
13 chr11:9913600-9921200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
14 chr11:9913600-9928800 Weak transcription Right Ventricle heart
15 chr11:9913800-9927400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
16 chr11:9914200-9926800 Weak transcription Brain Cingulate Gyrus brain
17 chr11:9914400-9927600 Weak transcription Brain Anterior Caudate brain
18 chr11:9915000-9921000 Weak transcription Hela-S3 cervix
19 chr11:9915000-9937200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
20 chr11:9915200-9922600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
21 chr11:9915400-9921400 Weak transcription NHLF lung
22 chr11:9915400-9923200 Weak transcription HSMMtube muscle
23 chr11:9915400-9926800 Weak transcription Brain Inferior Temporal Lobe brain
24 chr11:9915400-9927600 Weak transcription Colon Smooth Muscle Colon
25 chr11:9915600-9921200 Weak transcription Rectal Mucosa Donor 31 rectum
26 chr11:9915600-9923400 Weak transcription iPS-15b Cell Line embryonic stem cell
27 chr11:9915800-9923000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
28 chr11:9916600-9919000 Weak transcription Fetal Stomach stomach
29 chr11:9916600-9921400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
30 chr11:9916600-9923000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
31 chr11:9916600-9925200 Weak transcription Lung lung
32 chr11:9916600-9932600 Weak transcription Fetal Intestine Small intestine
33 chr11:9916800-9921000 Weak transcription ES-I3 Cell Line embryonic stem cell
34 chr11:9916800-9921800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
35 chr11:9916800-9922800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
36 chr11:9916800-9923600 Weak transcription H1 Cell Line embryonic stem cell
37 chr11:9916800-9925000 Weak transcription Fetal Adrenal Gland Adrenal Gland
38 chr11:9916800-9944400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
39 chr11:9916800-9944400 Weak transcription Primary hematopoietic stem cells short term culture blood
40 chr11:9917000-9923800 Weak transcription HUES6 Cell Line embryonic stem cell
41 chr11:9917000-9927600 Weak transcription Duodenum Mucosa Duodenum
42 chr11:9917000-9937200 Weak transcription Fetal Muscle Trunk muscle
43 chr11:9917200-9922800 Weak transcription iPS-20b Cell Line embryonic stem cell
44 chr11:9917200-9923000 Weak transcription HUES64 Cell Line embryonic stem cell
45 chr11:9917200-9925000 Weak transcription Ovary ovary
46 chr11:9917200-9927400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
47 chr11:9917400-9920200 Weak transcription Rectal Mucosa Donor 29 rectum
48 chr11:9917400-9921200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
49 chr11:9917400-9921200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
50 chr11:9917400-9921200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin

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Last update: Aug 31, 2015