The 2.0 version of rSNPBase

Variant report

Variant rs72858820
Chromosome Location chr11:10046944-10046945
allele C/G/T
Outlinks Ensembl   UCSC
Chromatin state (count:84 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:9981400-10051600 Weak transcription Aorta Aorta
2 chr11:9985800-10049000 Weak transcription Left Ventricle heart
3 chr11:9991200-10060000 Weak transcription Colon Smooth Muscle Colon
4 chr11:10001400-10066200 Weak transcription Pancreas Pancrea
5 chr11:10004200-10048600 Weak transcription Brain Angular Gyrus brain
6 chr11:10010600-10051200 Weak transcription Ovary ovary
7 chr11:10012600-10049000 Weak transcription Fetal Kidney kidney
8 chr11:10024200-10047800 Weak transcription Osteobl bone
9 chr11:10024800-10054000 Weak transcription Hela-S3 cervix
10 chr11:10030600-10047000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
11 chr11:10030600-10051400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
12 chr11:10030600-10054000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
13 chr11:10030600-10065800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
14 chr11:10032800-10049200 Weak transcription Fetal Muscle Trunk muscle
15 chr11:10034000-10047000 Weak transcription Cortex derived primary cultured neurospheres brain
16 chr11:10034400-10047800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
17 chr11:10035200-10065800 Weak transcription Stomach Smooth Muscle stomach
18 chr11:10035400-10051200 Weak transcription Psoas Muscle Psoas
19 chr11:10035800-10052800 Weak transcription Spleen Spleen
20 chr11:10036000-10049000 Weak transcription Placenta Placenta
21 chr11:10036000-10055600 Weak transcription NHEK skin
22 chr11:10036200-10047800 Weak transcription NHLF lung
23 chr11:10036200-10062800 Weak transcription Adipose Nuclei Adipose
24 chr11:10037600-10048000 Weak transcription Fetal Stomach stomach
25 chr11:10037600-10049400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
26 chr11:10038000-10047800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
27 chr11:10038200-10047600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
28 chr11:10039400-10047400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
29 chr11:10040400-10065800 Weak transcription HSMM muscle
30 chr11:10040600-10049400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
31 chr11:10042000-10048800 Weak transcription Rectal Mucosa Donor 29 rectum
32 chr11:10042000-10052200 Weak transcription Esophagus oesophagus
33 chr11:10042000-10052800 Weak transcription Lung lung
34 chr11:10042000-10053400 Weak transcription Rectal Mucosa Donor 31 rectum
35 chr11:10042000-10055800 Weak transcription HMEC breast
36 chr11:10042200-10048400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
37 chr11:10042200-10049400 Weak transcription H1 Cell Line embryonic stem cell
38 chr11:10042200-10049600 Weak transcription Duodenum Mucosa Duodenum
39 chr11:10042200-10054800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
40 chr11:10042200-10064400 Weak transcription Fetal Intestine Small intestine
41 chr11:10042200-10066000 Weak transcription Fetal Muscle Leg muscle
42 chr11:10042200-10066000 Weak transcription Skeletal Muscle Male skeletal muscle
43 chr11:10042200-10066200 Weak transcription Rectal Smooth Muscle rectum
44 chr11:10042400-10047000 Weak transcription Primary monocytes fromperipheralblood blood
45 chr11:10042400-10047600 Weak transcription Monocytes-CD14+_RO01746 blood
46 chr11:10042400-10048800 Weak transcription Breast Myoepithelial Primary Cells Breast
47 chr11:10042600-10066000 Weak transcription Duodenum Smooth Muscle Duodenum
48 chr11:10042800-10054200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
49 chr11:10043400-10047400 Weak transcription Primary T helper naive cells fromperipheralblood blood
50 chr11:10043400-10049400 Weak transcription Primary T cells fromperipheralblood blood

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Last update: Aug 31, 2015