The 2.0 version of rSNPBase

Variant report

Variant rs72861799
Chromosome Location chr11:10238865-10238866
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:24 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:10219000-10242200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
2 chr11:10227400-10240000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
3 chr11:10227600-10240200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
4 chr11:10227800-10239800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
5 chr11:10227800-10240000 Weak transcription H1 Cell Line embryonic stem cell
6 chr11:10227800-10242600 Weak transcription Esophagus oesophagus
7 chr11:10229600-10240200 Weak transcription Fetal Stomach stomach
8 chr11:10230200-10240000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
9 chr11:10230200-10240000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
10 chr11:10230200-10240200 Weak transcription Cortex derived primary cultured neurospheres brain
11 chr11:10230200-10240600 Weak transcription A549 lung
12 chr11:10230600-10246800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
13 chr11:10231000-10240000 Weak transcription Dnd41 blood
14 chr11:10231000-10240200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
15 chr11:10231000-10254400 Weak transcription NHDF-Ad bronchial
16 chr11:10231000-10254400 Weak transcription NHLF lung
17 chr11:10231200-10240000 Weak transcription Fetal Intestine Small intestine
18 chr11:10231400-10240200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
19 chr11:10231800-10240400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
20 chr11:10235400-10263400 Weak transcription Breast Myoepithelial Primary Cells Breast
21 chr11:10237000-10240000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
22 chr11:10237200-10240200 Weak transcription Fetal Adrenal Gland Adrenal Gland
23 chr11:10237800-10243400 Weak transcription HepG2 liver
24 chr11:10238800-10240200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived

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Last update: Aug 31, 2015