The 2.0 version of rSNPBase

Variant report

Variant rs66553354
Chromosome Location chr11:10025927-10025928
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:55 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:9981400-10051600 Weak transcription Aorta Aorta
2 chr11:9985800-10049000 Weak transcription Left Ventricle heart
3 chr11:9990400-10028200 Weak transcription Fetal Brain Female brain
4 chr11:9991200-10060000 Weak transcription Colon Smooth Muscle Colon
5 chr11:9994800-10041800 Weak transcription Rectal Smooth Muscle rectum
6 chr11:10001400-10066200 Weak transcription Pancreas Pancrea
7 chr11:10004200-10048600 Weak transcription Brain Angular Gyrus brain
8 chr11:10004600-10027600 Weak transcription Fetal Muscle Trunk muscle
9 chr11:10005200-10026400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
10 chr11:10005200-10027600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
11 chr11:10005400-10026400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
12 chr11:10005400-10026400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
13 chr11:10005400-10027200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
14 chr11:10005400-10027400 Weak transcription Fetal Stomach stomach
15 chr11:10005400-10027600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
16 chr11:10005400-10029000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
17 chr11:10005600-10026400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
18 chr11:10006800-10026200 Weak transcription ES-I3 Cell Line embryonic stem cell
19 chr11:10007200-10027200 Weak transcription HUES6 Cell Line embryonic stem cell
20 chr11:10007600-10041800 Weak transcription Skeletal Muscle Male skeletal muscle
21 chr11:10010600-10026400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
22 chr11:10010600-10030000 Weak transcription Primary T cells from cord blood blood
23 chr11:10010600-10051200 Weak transcription Ovary ovary
24 chr11:10011200-10027200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
25 chr11:10011600-10027200 Weak transcription Fetal Muscle Leg muscle
26 chr11:10011600-10028000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
27 chr11:10012000-10026200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
28 chr11:10012600-10049000 Weak transcription Fetal Kidney kidney
29 chr11:10013400-10026600 Weak transcription A549 lung
30 chr11:10017600-10026400 Weak transcription NHEK skin
31 chr11:10017600-10027200 Weak transcription Fetal Intestine Small intestine
32 chr11:10018000-10031400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
33 chr11:10020400-10026200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
34 chr11:10020400-10027000 Weak transcription Adipose Nuclei Adipose
35 chr11:10020400-10027200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
36 chr11:10020400-10027200 Weak transcription Cortex derived primary cultured neurospheres brain
37 chr11:10020400-10027400 Weak transcription Primary hematopoietic stem cells blood
38 chr11:10020400-10027600 Weak transcription Fetal Lung lung
39 chr11:10021000-10031400 Weak transcription Fetal Adrenal Gland Adrenal Gland
40 chr11:10021600-10026200 Weak transcription Breast Myoepithelial Primary Cells Breast
41 chr11:10021800-10030200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
42 chr11:10022000-10026400 Weak transcription Placenta Placenta
43 chr11:10022200-10027400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
44 chr11:10022600-10027200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
45 chr11:10022600-10027800 Weak transcription Monocytes-CD14+_RO01746 blood
46 chr11:10022600-10032400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
47 chr11:10023800-10033400 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
48 chr11:10024200-10047800 Weak transcription Osteobl bone
49 chr11:10024600-10041600 Weak transcription HUVEC blood vessel
50 chr11:10024800-10026000 Weak transcription HUES64 Cell Line embryonic stem cell

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Last update: Aug 31, 2015